Linux shecky.unidata.ucar.edu 2.6.23.17-88.fc7 #1 SMP Thu May 15 00:02:29 EDT 2008 x86_64 x86_64 x86_64 GNU/Linux ./configure --disable-f77 --disable-cxx --disable-utilities --prefix=/shecky/n362_test/install --disable-compiler-recover && make check check_install configure: netCDF 3.6.3-snapshot2008063023 checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes configure: checking user options checking whether CXX is set to ''... no checking whether FC is set to ''... no checking whether F90 is set to ''... no checking whether this is a netCDF-4.x build... no checking whether netCDF extra tests should be run (developers only)... no checking whether documentation is to be installed... no checking whether Fortran compiler(s) should be tested during configure... yes checking whether configure should try to set compiler flags... yes checking whether FFIO will be used... no checking whether to skip C++, F77, or F90 APIs if compiler is broken... no checking whether only the C library is desired... no checking whether examples should be built... yes checking whether F77 API is desired... no checking whether F90 API is desired... no checking whether fortran type sizes should be checked... yes checking whether C API is desired... yes checking where to get netCDF C-only library for separate fortran libraries... checking whether CXX API is desired... no checking whether v2 netCDF API should be built... yes checking whether the ncgen/ncdump should be built... no checking whether large file (> 2GB) tests should be run... no checking whether benchmaks should be run (experimental)... no checking whether extreme numbers should be used in tests... yes checking where to put large temp files if large file tests are run... . checking whether a win32 DLL is desired... no checking whether separate fortran libs are desired... no configure: finding C compiler checking for xlc... no checking for cc... cc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking for style of include used by make... 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(cached) yes configure: generating header files and makefiles configure: creating ./config.status config.status: creating Makefile config.status: creating man/Makefile config.status: creating man4/Makefile config.status: creating fortran/Makefile config.status: creating libsrc/Makefile config.status: creating libsrc4/Makefile config.status: creating nctest/Makefile config.status: creating nc_test4/Makefile config.status: creating nc_test/Makefile config.status: creating ncdump/Makefile config.status: creating ncgen/Makefile config.status: creating nf_test/Makefile config.status: creating cxx/Makefile config.status: creating cxx4/Makefile config.status: creating f90/Makefile config.status: creating examples/Makefile config.status: creating examples/C/Makefile config.status: creating examples/CDL/Makefile config.status: creating examples/CXX/Makefile config.status: creating examples/CXX4/Makefile config.status: creating examples/F90/Makefile config.status: creating examples/F77/Makefile config.status: creating win32/Makefile config.status: creating win32/NET/Makefile config.status: creating win32/NET/libsrc/Makefile config.status: creating win32/NET/ncdump/Makefile config.status: creating win32/NET/ncgen/Makefile config.status: creating win32/NET/examples/Makefile config.status: creating win32/NET/nctest/Makefile config.status: creating win32/NET/nc_test/Makefile config.status: creating config.h config.status: creating fortran/nfconfig1.inc config.status: executing depfiles commands config.status: executing libtool commands Making check in libsrc make[1]: Entering directory `/shecky/n362_test/libsrc' make check-am make[2]: Entering directory `/shecky/n362_test/libsrc' depbase=`echo attr.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT attr.lo -MD -MP -MF $depbase.Tpo -c -o attr.lo attr.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT attr.lo -MD -MP -MF .deps/attr.Tpo -c attr.c -o attr.o depbase=`echo ncx.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT ncx.lo -MD -MP -MF $depbase.Tpo -c -o ncx.lo ncx.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT ncx.lo -MD -MP -MF .deps/ncx.Tpo -c ncx.c -o ncx.o depbase=`echo putget.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT putget.lo -MD -MP -MF $depbase.Tpo -c -o putget.lo putget.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT putget.lo -MD -MP -MF .deps/putget.Tpo -c putget.c -o putget.o depbase=`echo dim.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT dim.lo -MD -MP -MF $depbase.Tpo -c -o dim.lo dim.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT dim.lo -MD -MP -MF .deps/dim.Tpo -c dim.c -o dim.o depbase=`echo error.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT error.lo -MD -MP -MF $depbase.Tpo -c -o error.lo error.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT error.lo -MD -MP -MF .deps/error.Tpo -c error.c -o error.o depbase=`echo libvers.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT libvers.lo -MD -MP -MF $depbase.Tpo -c -o libvers.lo libvers.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT libvers.lo -MD -MP -MF .deps/libvers.Tpo -c libvers.c -o libvers.o depbase=`echo nc.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT nc.lo -MD -MP -MF $depbase.Tpo -c -o nc.lo nc.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT nc.lo -MD -MP -MF .deps/nc.Tpo -c nc.c -o nc.o depbase=`echo string.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT string.lo -MD -MP -MF $depbase.Tpo -c -o string.lo string.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT string.lo -MD -MP -MF .deps/string.Tpo -c string.c -o string.o depbase=`echo v1hpg.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT v1hpg.lo -MD -MP -MF $depbase.Tpo -c -o v1hpg.lo v1hpg.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT v1hpg.lo -MD -MP -MF .deps/v1hpg.Tpo -c v1hpg.c -o v1hpg.o depbase=`echo var.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT var.lo -MD -MP -MF $depbase.Tpo -c -o var.lo var.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT var.lo -MD -MP -MF .deps/var.Tpo -c var.c -o var.o depbase=`echo utf8proc.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT utf8proc.lo -MD -MP -MF $depbase.Tpo -c -o utf8proc.lo utf8proc.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT utf8proc.lo -MD -MP -MF .deps/utf8proc.Tpo -c utf8proc.c -o utf8proc.o depbase=`echo posixio.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT posixio.lo -MD -MP -MF $depbase.Tpo -c -o posixio.lo posixio.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT posixio.lo -MD -MP -MF .deps/posixio.Tpo -c posixio.c -o posixio.o depbase=`echo v2i.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT v2i.lo -MD -MP -MF $depbase.Tpo -c -o v2i.lo v2i.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT v2i.lo -MD -MP -MF .deps/v2i.Tpo -c v2i.c -o v2i.o /bin/sh ../libtool --tag=CC --mode=link cc -g -O2 -o libnetcdf2.la v2i.lo libtool: link: ar cru .libs/libnetcdf2.a v2i.o libtool: link: ranlib .libs/libnetcdf2.a libtool: link: ( cd ".libs" && rm -f "libnetcdf2.la" && ln -s "../libnetcdf2.la" "libnetcdf2.la" ) /bin/sh ../libtool --tag=CC --mode=link cc -g -O2 -version-info 4:0:0 -o libnetcdf.la -rpath /shecky/n362_test/install/lib attr.lo ncx.lo putget.lo dim.lo error.lo libvers.lo nc.lo string.lo v1hpg.lo var.lo utf8proc.lo posixio.lo libnetcdf2.la libtool: link: (cd .libs/libnetcdf.lax/libnetcdf2.a && ar x "/shecky/n362_test/libsrc/./.libs/libnetcdf2.a") libtool: link: ar cru .libs/libnetcdf.a attr.o ncx.o putget.o dim.o error.o libvers.o nc.o string.o v1hpg.o var.o utf8proc.o posixio.o .libs/libnetcdf.lax/libnetcdf2.a/v2i.o libtool: link: ranlib .libs/libnetcdf.a libtool: link: rm -fr .libs/libnetcdf.lax libtool: link: ( cd ".libs" && rm -f "libnetcdf.la" && ln -s "../libnetcdf.la" "libnetcdf.la" ) make t_nc make[3]: Entering directory `/shecky/n362_test/libsrc' cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -g -O2 -MT t_nc-t_nc.o -MD -MP -MF .deps/t_nc-t_nc.Tpo -c -o t_nc-t_nc.o `test -f 't_nc.c' || echo './'`t_nc.c mv -f .deps/t_nc-t_nc.Tpo .deps/t_nc-t_nc.Po /bin/sh ../libtool --tag=CC --mode=link cc -g -O2 -o t_nc t_nc-t_nc.o libnetcdf.la libtool: link: cc -g -O2 -o t_nc t_nc-t_nc.o ./.libs/libnetcdf.a make[3]: Leaving directory `/shecky/n362_test/libsrc' make check-TESTS make[3]: Entering directory `/shecky/n362_test/libsrc' dimrename: IXX nc_close ret = 0 reopen id = 3 for filename test.nc NC done GATTR VAR VATTR VATTR VATTR VATTR VATTR VATTR fill_seq indices 1 2 3 75.000000 != 2.718282 Done got val = 3.250000 got val = 0.000000 got val = 2.718282 got val = 82555 got val = 97 got NC_CHAR val = A (0x41) got NC_CHAR val = B (0x42) got NC_CHAR val = "The red death had long devastated the country." got val = A (0x41) got val = B (0x42) got val = "The red death had long devastated the country." got vals = 0.000000 ... 447.000000 re nc_close ret = 0 PASS: t_nc ================== All 1 tests passed ================== make[3]: Leaving directory `/shecky/n362_test/libsrc' make[2]: Leaving directory `/shecky/n362_test/libsrc' make[1]: Leaving directory `/shecky/n362_test/libsrc' Making check in nctest make[1]: Entering directory `/shecky/n362_test/nctest' make nctest make[2]: Entering directory `/shecky/n362_test/nctest' depbase=`echo add.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT add.o -MD -MP -MF $depbase.Tpo -c -o add.o add.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo atttests.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT atttests.o -MD -MP -MF $depbase.Tpo -c -o atttests.o atttests.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo cdftests.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT cdftests.o -MD -MP -MF $depbase.Tpo -c -o cdftests.o cdftests.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo dimtests.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT dimtests.o -MD -MP -MF $depbase.Tpo -c -o dimtests.o dimtests.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo driver.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT driver.o -MD -MP -MF $depbase.Tpo -c -o driver.o driver.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo emalloc.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT emalloc.o -MD -MP -MF $depbase.Tpo -c -o emalloc.o emalloc.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo error.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT error.o -MD -MP -MF $depbase.Tpo -c -o error.o error.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo misctest.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT misctest.o -MD -MP -MF $depbase.Tpo -c -o misctest.o misctest.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo rec.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT rec.o -MD -MP -MF $depbase.Tpo -c -o rec.o rec.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo slabs.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT slabs.o -MD -MP -MF $depbase.Tpo -c -o slabs.o slabs.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo val.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT val.o -MD -MP -MF $depbase.Tpo -c -o val.o val.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo vardef.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT vardef.o -MD -MP -MF $depbase.Tpo -c -o vardef.o vardef.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo varget.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT varget.o -MD -MP -MF $depbase.Tpo -c -o varget.o varget.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo vargetg.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT vargetg.o -MD -MP -MF $depbase.Tpo -c -o vargetg.o vargetg.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo varput.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT varput.o -MD -MP -MF $depbase.Tpo -c -o varput.o varput.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo varputg.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT varputg.o -MD -MP -MF $depbase.Tpo -c -o varputg.o varputg.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo vartests.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT vartests.o -MD -MP -MF $depbase.Tpo -c -o vartests.o vartests.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo vputget.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT vputget.o -MD -MP -MF $depbase.Tpo -c -o vputget.o vputget.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo vputgetg.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT vputgetg.o -MD -MP -MF $depbase.Tpo -c -o vputgetg.o vputgetg.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ../libtool --tag=CC --mode=link cc -g -O2 -L../libsrc -o nctest add.o atttests.o cdftests.o dimtests.o driver.o emalloc.o error.o misctest.o rec.o slabs.o val.o vardef.o varget.o vargetg.o varput.o varputg.o vartests.o vputget.o vputgetg.o -lm ../libsrc/libnetcdf.la libtool: link: cc -g -O2 -o nctest add.o atttests.o cdftests.o dimtests.o driver.o emalloc.o error.o misctest.o rec.o slabs.o val.o vardef.o varget.o vargetg.o varput.o varputg.o vartests.o vputget.o vputgetg.o -L/shecky/n362_test/libsrc -lm ../libsrc/.libs/libnetcdf.a make[2]: Leaving directory `/shecky/n362_test/nctest' make check-TESTS make[2]: Entering directory `/shecky/n362_test/nctest' Testing V2 API with 2 different netCDF formats. Switching to netCDF classic format. *** Testing nccreate ... ok *** *** Testing ncopen ... ok *** *** Testing ncredef ... ok *** *** Testing ncendef ... ok *** *** Testing ncclose ... ok *** *** Testing ncinquire ... ok *** *** Testing ncsync ... ok *** *** Testing ncabort ... ok *** *** Testing ncdimdef ... ok *** *** Testing ncdimid ... ok *** *** Testing ncdiminq ... ok *** *** Testing ncdimrename ... ok *** *** Testing ncvardef ... ok *** *** Testing ncvarid ... ok *** *** Testing ncvarinq ... ok *** *** Testing ncvarput1 ... ok *** *** Testing ncvarget1 ... ok *** *** Testing ncvarput ... ok *** *** Testing ncvarget ... ok *** *** Testing ncvarputg ... ok *** *** Testing ncvargetg ... ok *** *** Testing ncrecinq ... ok *** *** Testing ncrecput ... ok *** *** Testing ncrecget ... ok *** *** Testing ncvarrename ... ok *** *** Testing ncattput ... ok *** *** Testing ncattinq ... ok *** *** Testing ncattget ... ok *** *** Testing ncattcopy ... ok *** *** Testing ncattname ... ok *** *** Testing ncattrename ... ok *** *** Testing ncattdel ... ok *** *** Testing nctypelen ... ok *** Switching to 64-bit offset format. *** Testing nccreate ... ok *** *** Testing ncopen ... ok *** *** Testing ncredef ... ok *** *** Testing ncendef ... ok *** *** Testing ncclose ... ok *** *** Testing ncinquire ... ok *** *** Testing ncsync ... ok *** *** Testing ncabort ... ok *** *** Testing ncdimdef ... ok *** *** Testing ncdimid ... ok *** *** Testing ncdiminq ... ok *** *** Testing ncdimrename ... ok *** *** Testing ncvardef ... ok *** *** Testing ncvarid ... ok *** *** Testing ncvarinq ... ok *** *** Testing ncvarput1 ... ok *** *** Testing ncvarget1 ... ok *** *** Testing ncvarput ... ok *** *** Testing ncvarget ... ok *** *** Testing ncvarputg ... ok *** *** Testing ncvargetg ... ok *** *** Testing ncrecinq ... ok *** *** Testing ncrecput ... ok *** *** Testing ncrecget ... ok *** *** Testing ncvarrename ... ok *** *** Testing ncattput ... ok *** *** Testing ncattinq ... ok *** *** Testing ncattget ... ok *** *** Testing ncattcopy ... ok *** *** Testing ncattname ... ok *** *** Testing ncattrename ... ok *** *** Testing ncattdel ... ok *** *** Testing nctypelen ... ok *** Total number of failures: 0 nctest SUCCESS!!! PASS: nctest PASS: compare_test_files.sh ================== All 2 tests passed ================== make[2]: Leaving directory `/shecky/n362_test/nctest' make[1]: Leaving directory `/shecky/n362_test/nctest' Making check in nc_test make[1]: Entering directory `/shecky/n362_test/nc_test' make tst_small nc_test tst_misc tst_norm tst_names make[2]: Entering directory `/shecky/n362_test/nc_test' depbase=`echo tst_small.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I.. -I../libsrc -g -O2 -MT tst_small.o -MD -MP -MF $depbase.Tpo -c -o tst_small.o tst_small.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ../libtool --tag=CC --mode=link cc -g -O2 -L../libsrc -o tst_small tst_small.o -lm ../libsrc/libnetcdf.la libtool: link: cc -g -O2 -o tst_small tst_small.o -L/shecky/n362_test/libsrc -lm ../libsrc/.libs/libnetcdf.a depbase=`echo nc_test.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I.. -I../libsrc -g -O2 -MT nc_test.o -MD -MP -MF $depbase.Tpo -c -o nc_test.o nc_test.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo error.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I.. -I../libsrc -g -O2 -MT error.o -MD -MP -MF $depbase.Tpo -c -o error.o error.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo test_get.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I.. -I../libsrc -g -O2 -MT test_get.o -MD -MP -MF $depbase.Tpo -c -o test_get.o test_get.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo test_put.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I.. -I../libsrc -g -O2 -MT test_put.o -MD -MP -MF $depbase.Tpo -c -o test_put.o test_put.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo test_read.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I.. -I../libsrc -g -O2 -MT test_read.o -MD -MP -MF $depbase.Tpo -c -o test_read.o test_read.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo test_write.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I.. -I../libsrc -g -O2 -MT test_write.o -MD -MP -MF $depbase.Tpo -c -o test_write.o test_write.c &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo util.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I.. -I../libsrc -g -O2 -MT util.o -MD -MP -MF $depbase.Tpo -c -o util.o util.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ../libtool --tag=CC --mode=link cc -g -O2 -L../libsrc -o nc_test nc_test.o error.o test_get.o test_put.o test_read.o test_write.o util.o -lm ../libsrc/libnetcdf.la libtool: link: cc -g -O2 -o nc_test nc_test.o error.o test_get.o test_put.o test_read.o test_write.o util.o -L/shecky/n362_test/libsrc -lm ../libsrc/.libs/libnetcdf.a depbase=`echo tst_misc.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I.. -I../libsrc -g -O2 -MT tst_misc.o -MD -MP -MF $depbase.Tpo -c -o tst_misc.o tst_misc.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ../libtool --tag=CC --mode=link cc -g -O2 -L../libsrc -o tst_misc tst_misc.o -lm ../libsrc/libnetcdf.la libtool: link: cc -g -O2 -o tst_misc tst_misc.o -L/shecky/n362_test/libsrc -lm ../libsrc/.libs/libnetcdf.a depbase=`echo tst_norm.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I.. -I../libsrc -g -O2 -MT tst_norm.o -MD -MP -MF $depbase.Tpo -c -o tst_norm.o tst_norm.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ../libtool --tag=CC --mode=link cc -g -O2 -L../libsrc -o tst_norm tst_norm.o -lm ../libsrc/libnetcdf.la libtool: link: cc -g -O2 -o tst_norm tst_norm.o -L/shecky/n362_test/libsrc -lm ../libsrc/.libs/libnetcdf.a depbase=`echo tst_names.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I.. -I../libsrc -g -O2 -MT tst_names.o -MD -MP -MF $depbase.Tpo -c -o tst_names.o tst_names.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ../libtool --tag=CC --mode=link cc -g -O2 -L../libsrc -o tst_names tst_names.o -lm ../libsrc/libnetcdf.la libtool: link: cc -g -O2 -o tst_names tst_names.o -L/shecky/n362_test/libsrc -lm ../libsrc/.libs/libnetcdf.a make[2]: Leaving directory `/shecky/n362_test/nc_test' make check-TESTS make[2]: Entering directory `/shecky/n362_test/nc_test' *** Testing small files. Switching to 64-bit offset format. *** testing simple small file with a global attribute...ok. *** testing simple small file with fixed dimensions...ok. *** testing simple small file with an unlimited dimension...ok. *** testing small file with one variable...ok. *** testing small file with one variable and one att...ok. *** testing small file with one record variable, which grows...ok. *** testing small file with one growing record variable, with attributes added...ok. *** testing small file with two growing record variables, with attributes added...ok. Switching to netCDF classic format. *** testing simple small file with a global attribute...ok. *** testing simple small file with fixed dimensions...ok. *** testing simple small file with an unlimited dimension...ok. *** testing small file with one variable...ok. *** testing small file with one variable and one att...ok. *** testing small file with one record variable, which grows...ok. *** testing small file with one growing record variable, with attributes added...ok. *** testing small file with two growing record variables, with attributes added...ok. *** Tests successful! PASS: tst_small Testing 2 different netCDF formats. Switching to netCDF classic format. *** Testing nc_strerror ... ok *** Testing nc_open ... ok *** Testing nc_close ... ok *** Testing nc_inq ... ok *** Testing nc_inq_dimid ... ok *** Testing nc_inq_dim ... ok *** Testing nc_inq_dimlen ... ok *** Testing nc_inq_dimname ... ok *** Testing nc_inq_varid ... ok *** Testing nc_inq_var ... ok *** Testing nc_inq_natts ... ok *** Testing nc_inq_ndims ... ok *** Testing nc_inq_nvars ... ok *** Testing nc_inq_unlimdim ... ok *** Testing nc_inq_vardimid ... ok *** Testing nc_inq_varname ... ok *** Testing nc_inq_varnatts ... ok *** Testing nc_inq_varndims ... ok *** Testing nc_inq_vartype ... ok *** Testing nc_get_var_text ... 179 good comparisons. ok *** Testing nc_get_var_uchar ... 264 good comparisons. ok *** Testing nc_get_var_schar ... 269 good comparisons. ok *** Testing nc_get_var_short ... 682 good comparisons. ok *** Testing nc_get_var_int ... 1189 good comparisons. ok *** Testing nc_get_var_long ... 1189 good comparisons. ok *** Testing nc_get_var_float ... 1194 good comparisons. ok *** Testing nc_get_var_double ... 1207 good comparisons. ok *** Testing nc_get_var1_text ... 179 good comparisons. ok *** Testing nc_get_var1_uchar ... 264 good comparisons. ok *** Testing nc_get_var1_schar ... 269 good comparisons. ok *** Testing nc_get_var1_short ... 682 good comparisons. ok *** Testing nc_get_var1_int ... 1189 good comparisons. ok *** Testing nc_get_var1_long ... 1189 good comparisons. ok *** Testing nc_get_var1_float ... 1194 good comparisons. ok *** Testing nc_get_var1_double ... 1207 good comparisons. ok *** Testing nc_get_var1 ... 1386 good comparisons. ok *** Testing nc_get_vara_text ... 179 good comparisons. ok *** Testing nc_get_vara_uchar ... 264 good comparisons. ok *** Testing nc_get_vara_schar ... 269 good comparisons. ok *** Testing nc_get_vara_short ... 682 good comparisons. ok *** Testing nc_get_vara_int ... 1189 good comparisons. ok *** Testing nc_get_vara_long ... 1189 good comparisons. ok *** Testing nc_get_vara_float ... 1194 good comparisons. ok *** Testing nc_get_vara_double ... 1207 good comparisons. ok *** Testing nc_get_vara ... 1386 good comparisons. ok *** Testing nc_get_vars_text ... 179 good comparisons. ok *** Testing nc_get_vars_uchar ... 264 good comparisons. ok *** Testing nc_get_vars_schar ... 269 good comparisons. ok *** Testing nc_get_vars_short ... 682 good comparisons. ok *** Testing nc_get_vars_int ... 1189 good comparisons. ok *** Testing nc_get_vars_long ... 1189 good comparisons. ok *** Testing nc_get_vars_float ... 1194 good comparisons. ok *** Testing nc_get_vars_double ... 1207 good comparisons. ok *** Testing nc_get_vars ... 1386 good comparisons. ok *** Testing nc_get_varm_text ... 179 good comparisons. ok *** Testing nc_get_varm_uchar ... 264 good comparisons. ok *** Testing nc_get_varm_schar ... 269 good comparisons. ok *** Testing nc_get_varm_short ... 682 good comparisons. ok *** Testing nc_get_varm_int ... 1189 good comparisons. ok *** Testing nc_get_varm_long ... 1189 good comparisons. ok *** Testing nc_get_varm_float ... 1194 good comparisons. ok *** Testing nc_get_varm_double ... 1207 good comparisons. ok *** Testing nc_get_varm ... 1386 good comparisons. ok *** Testing nc_get_att_text ... 7 good comparisons. ok *** Testing nc_get_att_uchar ... 5 good comparisons. ok *** Testing nc_get_att_schar ... 7 good comparisons. ok *** Testing nc_get_att_short ... 15 good comparisons. ok *** Testing nc_get_att_int ... 19 good comparisons. ok *** Testing nc_get_att_long ... 19 good comparisons. ok *** Testing nc_get_att_float ... 21 good comparisons. ok *** Testing nc_get_att_double ... 27 good comparisons. ok *** Testing nc_get_att ... 34 good comparisons. ok *** Testing nc_inq_att ... ok *** Testing nc_inq_attname ... ok *** Testing nc_inq_attid ... ok *** Testing nc_inq_attlen ... ok *** Testing nc_inq_atttype ... ok *** Testing nc_create ... ok *** Testing nc_redef ... 1386 good comparisons. 34 good comparisons. 1386 good comparisons. 34 good comparisons. ok *** Testing nc_sync ... 34 good comparisons. 1386 good comparisons. ok *** Testing nc_abort ... 1386 good comparisons. 34 good comparisons. ok *** Testing nc_def_dim ... ok *** Testing nc_rename_dim ... ok *** Testing nc_def_var ... ok *** Testing nc_put_var_text ... 179 good comparisons. ok *** Testing nc_put_var_uchar ... 264 good comparisons. ok *** Testing nc_put_var_schar ... 269 good comparisons. ok *** Testing nc_put_var_short ... 682 good comparisons. ok *** Testing nc_put_var_int ... 1189 good comparisons. ok *** Testing nc_put_var_long ... 1189 good comparisons. ok *** Testing nc_put_var_float ... 1194 good comparisons. ok *** Testing nc_put_var_double ... 1207 good comparisons. ok *** Testing nc_put_var1_text ... 179 good comparisons. ok *** Testing nc_put_var1_uchar ... 264 good comparisons. ok *** Testing nc_put_var1_schar ... 269 good comparisons. ok *** Testing nc_put_var1_short ... 682 good comparisons. ok *** Testing nc_put_var1_int ... 1189 good comparisons. ok *** Testing nc_put_var1_long ... 1189 good comparisons. ok *** Testing nc_put_var1_float ... 1194 good comparisons. ok *** Testing nc_put_var1_double ... 1207 good comparisons. ok *** Testing nc_put_var1 ... 1386 good comparisons. ok *** Testing nc_put_vara_text ... 179 good comparisons. ok *** Testing nc_put_vara_uchar ... 264 good comparisons. ok *** Testing nc_put_vara_schar ... 269 good comparisons. ok *** Testing nc_put_vara_short ... 682 good comparisons. ok *** Testing nc_put_vara_int ... 1189 good comparisons. ok *** Testing nc_put_vara_long ... 1189 good comparisons. ok *** Testing nc_put_vara_float ... 1194 good comparisons. ok *** Testing nc_put_vara_double ... 1207 good comparisons. ok *** Testing nc_put_vara ... 1386 good comparisons. ok *** Testing nc_put_vars_text ... 179 good comparisons. ok *** Testing nc_put_vars_uchar ... 264 good comparisons. ok *** Testing nc_put_vars_schar ... 269 good comparisons. ok *** Testing nc_put_vars_short ... 682 good comparisons. ok *** Testing nc_put_vars_int ... 1189 good comparisons. ok *** Testing nc_put_vars_long ... 1189 good comparisons. ok *** Testing nc_put_vars_float ... 1194 good comparisons. ok *** Testing nc_put_vars_double ... 1207 good comparisons. ok *** Testing nc_put_vars ... 1386 good comparisons. ok *** Testing nc_put_varm_text ... 179 good comparisons. ok *** Testing nc_put_varm_uchar ... 264 good comparisons. ok *** Testing nc_put_varm_schar ... 269 good comparisons. ok *** Testing nc_put_varm_short ... 682 good comparisons. ok *** Testing nc_put_varm_int ... 1189 good comparisons. ok *** Testing nc_put_varm_long ... 1189 good comparisons. ok *** Testing nc_put_varm_float ... 1194 good comparisons. ok *** Testing nc_put_varm_double ... 1207 good comparisons. ok *** Testing nc_put_varm ... 1386 good comparisons. ok *** Testing nc_rename_var ... 1386 good comparisons. ok *** Testing nc_put_att_text ... 7 good comparisons. ok *** Testing nc_put_att_uchar ... 5 good comparisons. ok *** Testing nc_put_att_schar ... 7 good comparisons. ok *** Testing nc_put_att_short ... 15 good comparisons. ok *** Testing nc_put_att_int ... 19 good comparisons. ok *** Testing nc_put_att_long ... 19 good comparisons. ok *** Testing nc_put_att_float ... 21 good comparisons. ok *** Testing nc_put_att_double ... 27 good comparisons. ok *** Testing nc_put_att ... 34 good comparisons. ok *** Testing nc_copy_att ... 34 good comparisons. ok *** Testing nc_rename_att ... 34 good comparisons. ok *** Testing nc_del_att ... ok *** Testing nc_set_default_format ... ok Switching to 64-bit offset format. *** Testing nc_strerror ... ok *** Testing nc_open ... ok *** Testing nc_close ... ok *** Testing nc_inq ... ok *** Testing nc_inq_dimid ... ok *** Testing nc_inq_dim ... ok *** Testing nc_inq_dimlen ... ok *** Testing nc_inq_dimname ... ok *** Testing nc_inq_varid ... ok *** Testing nc_inq_var ... ok *** Testing nc_inq_natts ... ok *** Testing nc_inq_ndims ... ok *** Testing nc_inq_nvars ... ok *** Testing nc_inq_unlimdim ... ok *** Testing nc_inq_vardimid ... ok *** Testing nc_inq_varname ... ok *** Testing nc_inq_varnatts ... ok *** Testing nc_inq_varndims ... ok *** Testing nc_inq_vartype ... ok *** Testing nc_get_var_text ... 179 good comparisons. ok *** Testing nc_get_var_uchar ... 264 good comparisons. ok *** Testing nc_get_var_schar ... 269 good comparisons. ok *** Testing nc_get_var_short ... 682 good comparisons. ok *** Testing nc_get_var_int ... 1189 good comparisons. ok *** Testing nc_get_var_long ... 1189 good comparisons. ok *** Testing nc_get_var_float ... 1194 good comparisons. ok *** Testing nc_get_var_double ... 1207 good comparisons. ok *** Testing nc_get_var1_text ... 179 good comparisons. ok *** Testing nc_get_var1_uchar ... 264 good comparisons. ok *** Testing nc_get_var1_schar ... 269 good comparisons. ok *** Testing nc_get_var1_short ... 682 good comparisons. ok *** Testing nc_get_var1_int ... 1189 good comparisons. ok *** Testing nc_get_var1_long ... 1189 good comparisons. ok *** Testing nc_get_var1_float ... 1194 good comparisons. ok *** Testing nc_get_var1_double ... 1207 good comparisons. ok *** Testing nc_get_var1 ... 1386 good comparisons. ok *** Testing nc_get_vara_text ... 179 good comparisons. ok *** Testing nc_get_vara_uchar ... 264 good comparisons. ok *** Testing nc_get_vara_schar ... 269 good comparisons. ok *** Testing nc_get_vara_short ... 682 good comparisons. ok *** Testing nc_get_vara_int ... 1189 good comparisons. ok *** Testing nc_get_vara_long ... 1189 good comparisons. ok *** Testing nc_get_vara_float ... 1194 good comparisons. ok *** Testing nc_get_vara_double ... 1207 good comparisons. ok *** Testing nc_get_vara ... 1386 good comparisons. ok *** Testing nc_get_vars_text ... 179 good comparisons. ok *** Testing nc_get_vars_uchar ... 264 good comparisons. ok *** Testing nc_get_vars_schar ... 269 good comparisons. ok *** Testing nc_get_vars_short ... 682 good comparisons. ok *** Testing nc_get_vars_int ... 1189 good comparisons. ok *** Testing nc_get_vars_long ... 1189 good comparisons. ok *** Testing nc_get_vars_float ... 1194 good comparisons. ok *** Testing nc_get_vars_double ... 1207 good comparisons. ok *** Testing nc_get_vars ... 1386 good comparisons. ok *** Testing nc_get_varm_text ... 179 good comparisons. ok *** Testing nc_get_varm_uchar ... 264 good comparisons. ok *** Testing nc_get_varm_schar ... 269 good comparisons. ok *** Testing nc_get_varm_short ... 682 good comparisons. ok *** Testing nc_get_varm_int ... 1189 good comparisons. ok *** Testing nc_get_varm_long ... 1189 good comparisons. ok *** Testing nc_get_varm_float ... 1194 good comparisons. ok *** Testing nc_get_varm_double ... 1207 good comparisons. ok *** Testing nc_get_varm ... 1386 good comparisons. ok *** Testing nc_get_att_text ... 7 good comparisons. ok *** Testing nc_get_att_uchar ... 5 good comparisons. ok *** Testing nc_get_att_schar ... 7 good comparisons. ok *** Testing nc_get_att_short ... 15 good comparisons. ok *** Testing nc_get_att_int ... 19 good comparisons. ok *** Testing nc_get_att_long ... 19 good comparisons. ok *** Testing nc_get_att_float ... 21 good comparisons. ok *** Testing nc_get_att_double ... 27 good comparisons. ok *** Testing nc_get_att ... 34 good comparisons. ok *** Testing nc_inq_att ... ok *** Testing nc_inq_attname ... ok *** Testing nc_inq_attid ... ok *** Testing nc_inq_attlen ... ok *** Testing nc_inq_atttype ... ok *** Testing nc_create ... ok *** Testing nc_redef ... 1386 good comparisons. 34 good comparisons. 1386 good comparisons. 34 good comparisons. ok *** Testing nc_sync ... 34 good comparisons. 1386 good comparisons. ok *** Testing nc_abort ... 1386 good comparisons. 34 good comparisons. ok *** Testing nc_def_dim ... ok *** Testing nc_rename_dim ... ok *** Testing nc_def_var ... ok *** Testing nc_put_var_text ... 179 good comparisons. ok *** Testing nc_put_var_uchar ... 264 good comparisons. ok *** Testing nc_put_var_schar ... 269 good comparisons. ok *** Testing nc_put_var_short ... 682 good comparisons. ok *** Testing nc_put_var_int ... 1189 good comparisons. ok *** Testing nc_put_var_long ... 1189 good comparisons. ok *** Testing nc_put_var_float ... 1194 good comparisons. ok *** Testing nc_put_var_double ... 1207 good comparisons. ok *** Testing nc_put_var1_text ... 179 good comparisons. ok *** Testing nc_put_var1_uchar ... 264 good comparisons. ok *** Testing nc_put_var1_schar ... 269 good comparisons. ok *** Testing nc_put_var1_short ... 682 good comparisons. ok *** Testing nc_put_var1_int ... 1189 good comparisons. ok *** Testing nc_put_var1_long ... 1189 good comparisons. ok *** Testing nc_put_var1_float ... 1194 good comparisons. ok *** Testing nc_put_var1_double ... 1207 good comparisons. ok *** Testing nc_put_var1 ... 1386 good comparisons. ok *** Testing nc_put_vara_text ... 179 good comparisons. ok *** Testing nc_put_vara_uchar ... 264 good comparisons. ok *** Testing nc_put_vara_schar ... 269 good comparisons. ok *** Testing nc_put_vara_short ... 682 good comparisons. ok *** Testing nc_put_vara_int ... 1189 good comparisons. ok *** Testing nc_put_vara_long ... 1189 good comparisons. ok *** Testing nc_put_vara_float ... 1194 good comparisons. ok *** Testing nc_put_vara_double ... 1207 good comparisons. ok *** Testing nc_put_vara ... 1386 good comparisons. ok *** Testing nc_put_vars_text ... 179 good comparisons. ok *** Testing nc_put_vars_uchar ... 264 good comparisons. ok *** Testing nc_put_vars_schar ... 269 good comparisons. ok *** Testing nc_put_vars_short ... 682 good comparisons. ok *** Testing nc_put_vars_int ... 1189 good comparisons. ok *** Testing nc_put_vars_long ... 1189 good comparisons. ok *** Testing nc_put_vars_float ... 1194 good comparisons. ok *** Testing nc_put_vars_double ... 1207 good comparisons. ok *** Testing nc_put_vars ... 1386 good comparisons. ok *** Testing nc_put_varm_text ... 179 good comparisons. ok *** Testing nc_put_varm_uchar ... 264 good comparisons. ok *** Testing nc_put_varm_schar ... 269 good comparisons. ok *** Testing nc_put_varm_short ... 682 good comparisons. ok *** Testing nc_put_varm_int ... 1189 good comparisons. ok *** Testing nc_put_varm_long ... 1189 good comparisons. ok *** Testing nc_put_varm_float ... 1194 good comparisons. ok *** Testing nc_put_varm_double ... 1207 good comparisons. ok *** Testing nc_put_varm ... 1386 good comparisons. ok *** Testing nc_rename_var ... 1386 good comparisons. ok *** Testing nc_put_att_text ... 7 good comparisons. ok *** Testing nc_put_att_uchar ... 5 good comparisons. ok *** Testing nc_put_att_schar ... 7 good comparisons. ok *** Testing nc_put_att_short ... 15 good comparisons. ok *** Testing nc_put_att_int ... 19 good comparisons. ok *** Testing nc_put_att_long ... 19 good comparisons. ok *** Testing nc_put_att_float ... 21 good comparisons. ok *** Testing nc_put_att_double ... 27 good comparisons. ok *** Testing nc_put_att ... 34 good comparisons. ok *** Testing nc_copy_att ... 34 good comparisons. ok *** Testing nc_rename_att ... 34 good comparisons. ok *** Testing nc_del_att ... ok *** Testing nc_set_default_format ... ok *** Total number of failures: 0 *** nc_test SUCCESS!!! PASS: nc_test *** Testing some extra stuff. *** Trying to open non-netCDF files of tiny length...ok. *** Tests successful! PASS: tst_misc *** testing UTF-8 normalization...ok. *** Tests successful! PASS: tst_norm *** testing names with file tst_names.nc... *** switching to netCDF classic format...ok. *** switching to netCDF 64-bit offset format...ok. *** Tests successful! PASS: tst_names ================== All 5 tests passed ================== make[2]: Leaving directory `/shecky/n362_test/nc_test' make[1]: Leaving directory `/shecky/n362_test/nc_test' Making check in man make[1]: Entering directory `/shecky/n362_test/man' make[1]: Nothing to be done for `check'. make[1]: Leaving directory `/shecky/n362_test/man' Making check in examples make[1]: Entering directory `/shecky/n362_test/examples' Making check in C make[2]: Entering directory `/shecky/n362_test/examples/C' make simple_xy_wr simple_xy_rd sfc_pres_temp_wr sfc_pres_temp_rd pres_temp_4D_wr pres_temp_4D_rd make[3]: Entering directory `/shecky/n362_test/examples/C' depbase=`echo simple_xy_wr.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I../.. -I../../fortran -I../.. -I../../libsrc -g -O2 -MT simple_xy_wr.o -MD -MP -MF $depbase.Tpo -c -o simple_xy_wr.o simple_xy_wr.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ../../libtool --tag=CC --mode=link cc -g -O2 -L../../libsrc -o simple_xy_wr simple_xy_wr.o -lm ../../libsrc/libnetcdf.la libtool: link: cc -g -O2 -o simple_xy_wr simple_xy_wr.o -L/shecky/n362_test/libsrc -lm ../../libsrc/.libs/libnetcdf.a depbase=`echo simple_xy_rd.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I../.. -I../../fortran -I../.. -I../../libsrc -g -O2 -MT simple_xy_rd.o -MD -MP -MF $depbase.Tpo -c -o simple_xy_rd.o simple_xy_rd.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ../../libtool --tag=CC --mode=link cc -g -O2 -L../../libsrc -o simple_xy_rd simple_xy_rd.o -lm ../../libsrc/libnetcdf.la libtool: link: cc -g -O2 -o simple_xy_rd simple_xy_rd.o -L/shecky/n362_test/libsrc -lm ../../libsrc/.libs/libnetcdf.a depbase=`echo sfc_pres_temp_wr.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I../.. -I../../fortran -I../.. -I../../libsrc -g -O2 -MT sfc_pres_temp_wr.o -MD -MP -MF $depbase.Tpo -c -o sfc_pres_temp_wr.o sfc_pres_temp_wr.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ../../libtool --tag=CC --mode=link cc -g -O2 -L../../libsrc -o sfc_pres_temp_wr sfc_pres_temp_wr.o -lm ../../libsrc/libnetcdf.la libtool: link: cc -g -O2 -o sfc_pres_temp_wr sfc_pres_temp_wr.o -L/shecky/n362_test/libsrc -lm ../../libsrc/.libs/libnetcdf.a depbase=`echo sfc_pres_temp_rd.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I../.. -I../../fortran -I../.. -I../../libsrc -g -O2 -MT sfc_pres_temp_rd.o -MD -MP -MF $depbase.Tpo -c -o sfc_pres_temp_rd.o sfc_pres_temp_rd.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ../../libtool --tag=CC --mode=link cc -g -O2 -L../../libsrc -o sfc_pres_temp_rd sfc_pres_temp_rd.o -lm ../../libsrc/libnetcdf.la libtool: link: cc -g -O2 -o sfc_pres_temp_rd sfc_pres_temp_rd.o -L/shecky/n362_test/libsrc -lm ../../libsrc/.libs/libnetcdf.a depbase=`echo pres_temp_4D_wr.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I../.. -I../../fortran -I../.. -I../../libsrc -g -O2 -MT pres_temp_4D_wr.o -MD -MP -MF $depbase.Tpo -c -o pres_temp_4D_wr.o pres_temp_4D_wr.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ../../libtool --tag=CC --mode=link cc -g -O2 -L../../libsrc -o pres_temp_4D_wr pres_temp_4D_wr.o -lm ../../libsrc/libnetcdf.la libtool: link: cc -g -O2 -o pres_temp_4D_wr pres_temp_4D_wr.o -L/shecky/n362_test/libsrc -lm ../../libsrc/.libs/libnetcdf.a depbase=`echo pres_temp_4D_rd.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I../.. -I../../fortran -I../.. -I../../libsrc -g -O2 -MT pres_temp_4D_rd.o -MD -MP -MF $depbase.Tpo -c -o pres_temp_4D_rd.o pres_temp_4D_rd.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ../../libtool --tag=CC --mode=link cc -g -O2 -L../../libsrc -o pres_temp_4D_rd pres_temp_4D_rd.o -lm ../../libsrc/libnetcdf.la libtool: link: cc -g -O2 -o pres_temp_4D_rd pres_temp_4D_rd.o -L/shecky/n362_test/libsrc -lm ../../libsrc/.libs/libnetcdf.a make[3]: Leaving directory `/shecky/n362_test/examples/C' make check-TESTS make[3]: Entering directory `/shecky/n362_test/examples/C' *** SUCCESS writing example file simple_xy.nc! PASS: simple_xy_wr *** SUCCESS reading example file simple_xy.nc! PASS: simple_xy_rd *** SUCCESS writing example file sfc_pres_temp.nc! PASS: sfc_pres_temp_wr *** SUCCESS reading example file sfc_pres_temp.nc! PASS: sfc_pres_temp_rd *** SUCCESS writing example file pres_temp_4D.nc! PASS: pres_temp_4D_wr *** SUCCESS reading example file pres_temp_4D.nc! PASS: pres_temp_4D_rd ================== All 6 tests passed ================== make[3]: Leaving directory `/shecky/n362_test/examples/C' make[2]: Leaving directory `/shecky/n362_test/examples/C' make[2]: Entering directory `/shecky/n362_test/examples' make[2]: Nothing to be done for `check-am'. make[2]: Leaving directory `/shecky/n362_test/examples' make[1]: Leaving directory `/shecky/n362_test/examples' Making check in win32 make[1]: Entering directory `/shecky/n362_test/win32' Making check in NET make[2]: Entering directory `/shecky/n362_test/win32/NET' Making check in examples make[3]: Entering directory `/shecky/n362_test/win32/NET/examples' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/shecky/n362_test/win32/NET/examples' Making check in libsrc make[3]: Entering directory `/shecky/n362_test/win32/NET/libsrc' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/shecky/n362_test/win32/NET/libsrc' Making check in ncdump make[3]: Entering directory `/shecky/n362_test/win32/NET/ncdump' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/shecky/n362_test/win32/NET/ncdump' Making check in ncgen make[3]: Entering directory `/shecky/n362_test/win32/NET/ncgen' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/shecky/n362_test/win32/NET/ncgen' Making check in nctest make[3]: Entering directory `/shecky/n362_test/win32/NET/nctest' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/shecky/n362_test/win32/NET/nctest' Making check in nc_test make[3]: Entering directory `/shecky/n362_test/win32/NET/nc_test' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/shecky/n362_test/win32/NET/nc_test' make[3]: Entering directory `/shecky/n362_test/win32/NET' make[3]: Nothing to be done for `check-am'. make[3]: Leaving directory `/shecky/n362_test/win32/NET' make[2]: Leaving directory `/shecky/n362_test/win32/NET' make[2]: Entering directory `/shecky/n362_test/win32' make[2]: Nothing to be done for `check-am'. make[2]: Leaving directory `/shecky/n362_test/win32' make[1]: Leaving directory `/shecky/n362_test/win32' make[1]: Entering directory `/shecky/n362_test' make[1]: Nothing to be done for `check-am'. make[1]: Leaving directory `/shecky/n362_test' Making install in libsrc make[1]: Entering directory `/shecky/n362_test/libsrc' make install-am make[2]: Entering directory `/shecky/n362_test/libsrc' make[3]: Entering directory `/shecky/n362_test/libsrc' test -z "/shecky/n362_test/install/lib" || /bin/mkdir -p "/shecky/n362_test/install/lib" /bin/sh ../libtool --mode=install /usr/bin/install -c 'libnetcdf.la' '/shecky/n362_test/install/lib/libnetcdf.la' libtool: install: /usr/bin/install -c .libs/libnetcdf.lai /shecky/n362_test/install/lib/libnetcdf.la libtool: install: /usr/bin/install -c .libs/libnetcdf.a /shecky/n362_test/install/lib/libnetcdf.a libtool: install: chmod 644 /shecky/n362_test/install/lib/libnetcdf.a libtool: install: ranlib /shecky/n362_test/install/lib/libnetcdf.a libtool: finish: PATH="/usr/local/bin:/usr/bin:/bin:/opt/gnu/bin:/usr/sbin:/sbin:/opt/bin:/sbin:/usr/kerberos/bin:/usr/X11R6/bin:/opt/absoft10.0/bin:/sbin" ldconfig -n /shecky/n362_test/install/lib ---------------------------------------------------------------------- Libraries have been installed in: /shecky/n362_test/install/lib If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the `-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the `LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the `LD_RUN_PATH' environment variable during linking - use the `-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to `/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- test -z "/shecky/n362_test/install/include" || /bin/mkdir -p "/shecky/n362_test/install/include" /usr/bin/install -c -m 644 'netcdf.h' '/shecky/n362_test/install/include/netcdf.h' test -z "/shecky/n362_test/install/share/man/man3" || /bin/mkdir -p "/shecky/n362_test/install/share/man/man3" /usr/bin/install -c -m 644 './netcdf.3' '/shecky/n362_test/install/share/man/man3/netcdf.3' make[3]: Leaving directory `/shecky/n362_test/libsrc' make[2]: Leaving directory `/shecky/n362_test/libsrc' make[1]: Leaving directory `/shecky/n362_test/libsrc' Making install in nctest make[1]: Entering directory `/shecky/n362_test/nctest' make[2]: Entering directory `/shecky/n362_test/nctest' make[2]: Nothing to be done for `install-exec-am'. make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/shecky/n362_test/nctest' make[1]: Leaving directory `/shecky/n362_test/nctest' Making install in nc_test make[1]: Entering directory `/shecky/n362_test/nc_test' make[2]: Entering directory `/shecky/n362_test/nc_test' make[2]: Nothing to be done for `install-exec-am'. make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/shecky/n362_test/nc_test' make[1]: Leaving directory `/shecky/n362_test/nc_test' Making install in man make[1]: Entering directory `/shecky/n362_test/man' make[2]: Entering directory `/shecky/n362_test/man' make[2]: Nothing to be done for `install-exec-am'. test -z "/shecky/n362_test/install/share/doc/netcdf" || /bin/mkdir -p "/shecky/n362_test/install/share/doc/netcdf" test -z "/shecky/n362_test/install/share/info" || /bin/mkdir -p "/shecky/n362_test/install/share/info" /usr/bin/install -c -m 644 './netcdf.info' '/shecky/n362_test/install/share/info/netcdf.info' /usr/bin/install -c -m 644 './netcdf-install.info' '/shecky/n362_test/install/share/info/netcdf-install.info' /usr/bin/install -c -m 644 './netcdf-c.info' '/shecky/n362_test/install/share/info/netcdf-c.info' /usr/bin/install -c -m 644 './netcdf-tutorial.info' '/shecky/n362_test/install/share/info/netcdf-tutorial.info' /usr/bin/install -c -m 644 './netcdf-f77.info' '/shecky/n362_test/install/share/info/netcdf-f77.info' /usr/bin/install -c -m 644 './netcdf-f90.info' '/shecky/n362_test/install/share/info/netcdf-f90.info' /usr/bin/install -c -m 644 './netcdf-cxx.info' '/shecky/n362_test/install/share/info/netcdf-cxx.info' install-info --info-dir='/shecky/n362_test/install/share/info' '/shecky/n362_test/install/share/info/netcdf.info' install-info --info-dir='/shecky/n362_test/install/share/info' '/shecky/n362_test/install/share/info/netcdf-install.info' install-info --info-dir='/shecky/n362_test/install/share/info' '/shecky/n362_test/install/share/info/netcdf-c.info' install-info --info-dir='/shecky/n362_test/install/share/info' '/shecky/n362_test/install/share/info/netcdf-tutorial.info' install-info --info-dir='/shecky/n362_test/install/share/info' '/shecky/n362_test/install/share/info/netcdf-f77.info' install-info --info-dir='/shecky/n362_test/install/share/info' '/shecky/n362_test/install/share/info/netcdf-f90.info' install-info --info-dir='/shecky/n362_test/install/share/info' '/shecky/n362_test/install/share/info/netcdf-cxx.info' make[2]: Leaving directory `/shecky/n362_test/man' make[1]: Leaving directory `/shecky/n362_test/man' Making install in examples make[1]: Entering directory `/shecky/n362_test/examples' Making install in C make[2]: Entering directory `/shecky/n362_test/examples/C' make[3]: Entering directory `/shecky/n362_test/examples/C' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/shecky/n362_test/examples/C' make[2]: Leaving directory `/shecky/n362_test/examples/C' make[2]: Entering directory `/shecky/n362_test/examples' make[3]: Entering directory `/shecky/n362_test/examples' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/shecky/n362_test/examples' make[2]: Leaving directory `/shecky/n362_test/examples' make[1]: Leaving directory `/shecky/n362_test/examples' Making install in win32 make[1]: Entering directory `/shecky/n362_test/win32' Making install in NET make[2]: Entering directory `/shecky/n362_test/win32/NET' Making install in examples make[3]: Entering directory `/shecky/n362_test/win32/NET/examples' make[4]: Entering directory `/shecky/n362_test/win32/NET/examples' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shecky/n362_test/win32/NET/examples' make[3]: Leaving directory `/shecky/n362_test/win32/NET/examples' Making install in libsrc make[3]: Entering directory `/shecky/n362_test/win32/NET/libsrc' make[4]: Entering directory `/shecky/n362_test/win32/NET/libsrc' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shecky/n362_test/win32/NET/libsrc' make[3]: Leaving directory `/shecky/n362_test/win32/NET/libsrc' Making install in ncdump make[3]: Entering directory `/shecky/n362_test/win32/NET/ncdump' make[4]: Entering directory `/shecky/n362_test/win32/NET/ncdump' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shecky/n362_test/win32/NET/ncdump' make[3]: Leaving directory `/shecky/n362_test/win32/NET/ncdump' Making install in ncgen make[3]: Entering directory `/shecky/n362_test/win32/NET/ncgen' make[4]: Entering directory `/shecky/n362_test/win32/NET/ncgen' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shecky/n362_test/win32/NET/ncgen' make[3]: Leaving directory `/shecky/n362_test/win32/NET/ncgen' Making install in nctest make[3]: Entering directory `/shecky/n362_test/win32/NET/nctest' make[4]: Entering directory `/shecky/n362_test/win32/NET/nctest' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shecky/n362_test/win32/NET/nctest' make[3]: Leaving directory `/shecky/n362_test/win32/NET/nctest' Making install in nc_test make[3]: Entering directory `/shecky/n362_test/win32/NET/nc_test' make[4]: Entering directory `/shecky/n362_test/win32/NET/nc_test' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shecky/n362_test/win32/NET/nc_test' make[3]: Leaving directory `/shecky/n362_test/win32/NET/nc_test' make[3]: Entering directory `/shecky/n362_test/win32/NET' make[4]: Entering directory `/shecky/n362_test/win32/NET' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shecky/n362_test/win32/NET' make[3]: Leaving directory `/shecky/n362_test/win32/NET' make[2]: Leaving directory `/shecky/n362_test/win32/NET' make[2]: Entering directory `/shecky/n362_test/win32' make[3]: Entering directory `/shecky/n362_test/win32' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/shecky/n362_test/win32' make[2]: Leaving directory `/shecky/n362_test/win32' make[1]: Leaving directory `/shecky/n362_test/win32' make[1]: Entering directory `/shecky/n362_test' make[2]: Entering directory `/shecky/n362_test' make[2]: Nothing to be done for `install-exec-am'. make install-data-hook make[3]: Entering directory `/shecky/n362_test' +-------------------------------------------------------------+ | Congratulations! You have successfully installed netCDF! | | | | CAUTION: | | | | If you have not already run "make check", then we strongly | | recommend you do so. It does not take very long. | | | | Before using netCDF to store important data, test your | | build with "make check". | | | | NetCDF is tested nightly on many platforms at Unidata | | but your platform is probably different in some ways. | | | | If any tests fail, please see the netCDF web site: | | http://www.unidata.ucar.edu/software/netcdf/ | | | | NetCDF is developed and maintained at the Unidata Program | | Center. Unidata provides a broad array of data and software | | tools for use in geoscience education and research. | | http://www.unidata.ucar.edu | +-------------------------------------------------------------+ make[3]: Leaving directory `/shecky/n362_test' make[2]: Leaving directory `/shecky/n362_test' make[1]: Leaving directory `/shecky/n362_test' [ -f /shecky/n362_test/install/include/netcdf.h ] || (echo "Missing!" && exit 1) [ -f /shecky/n362_test/install/share/man/man3/netcdf.3 ] || (echo "Missing!" && exit 1) [ -f /shecky/n362_test/install/lib/libnetcdf.a ] || (echo "Missing!" && exit 1) echo " *** SUCCESS: all files were found!" *** SUCCESS: all files were found! This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by netCDF configure 3.6.3-snapshot2008063023, which was generated by GNU Autoconf 2.62. Invocation command line was $ ./configure --disable-f77 --disable-cxx --disable-utilities --prefix=/shecky/n362_test/install --disable-compiler-recover ## --------- ## ## Platform. ## ## --------- ## hostname = shecky.unidata.ucar.edu uname -m = x86_64 uname -r = 2.6.23.17-88.fc7 uname -s = Linux uname -v = #1 SMP Thu May 15 00:02:29 EDT 2008 /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /usr/local/bin PATH: /usr/bin PATH: /bin PATH: /opt/gnu/bin PATH: /usr/sbin PATH: /sbin PATH: /opt/bin PATH: /sbin PATH: /usr/kerberos/bin PATH: /usr/X11R6/bin PATH: /opt/absoft10.0/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:2200: netCDF 3.6.3-snapshot2008063023 configure:2241: checking build system type configure:2259: result: x86_64-unknown-linux-gnu configure:2281: checking host system type configure:2296: result: x86_64-unknown-linux-gnu configure:2343: checking for a BSD-compatible install configure:2411: result: /usr/bin/install -c configure:2422: checking whether build environment is sane configure:2465: result: yes configure:2490: checking for a thread-safe mkdir -p configure:2529: result: /bin/mkdir -p configure:2542: checking for gawk configure:2558: found /usr/bin/gawk configure:2569: result: gawk configure:2580: checking whether make sets $(MAKE) configure:2602: result: yes configure:2794: checking user options configure:2837: checking whether CXX is set to '' configure:2841: result: no configure:2845: checking whether FC is set to '' configure:2849: result: no configure:2853: checking whether F90 is set to '' configure:2857: result: no configure:2861: checking whether this is a netCDF-4.x build configure:2869: result: no configure:2961: checking whether netCDF extra tests should be run (developers only) configure:2969: result: no configure:2988: checking whether documentation is to be installed configure:2996: result: no configure:3008: checking whether Fortran compiler(s) should be tested during configure configure:3016: result: yes configure:3021: checking whether configure should try to set compiler flags configure:3029: result: yes configure:3033: checking whether FFIO will be used configure:3041: result: no configure:3054: checking whether to skip C++, F77, or F90 APIs if compiler is broken configure:3062: result: no configure:3066: checking whether only the C library is desired configure:3074: result: no configure:3093: checking whether examples should be built configure:3101: result: yes configure:3105: checking whether F77 API is desired configure:3114: result: no configure:3119: checking whether F90 API is desired configure:3129: result: no configure:3133: checking whether fortran type sizes should be checked configure:3141: result: yes configure:3147: checking whether C API is desired configure:3155: result: yes configure:3162: checking where to get netCDF C-only library for separate fortran libraries configure:3178: result: configure:3193: checking whether CXX API is desired configure:3202: result: no configure:3213: checking whether v2 netCDF API should be built configure:3221: result: yes configure:3240: checking whether the ncgen/ncdump should be built configure:3249: result: no configure:3261: checking whether large file (> 2GB) tests should be run configure:3269: result: no configure:3288: checking whether benchmaks should be run (experimental) configure:3296: result: no configure:3308: checking whether extreme numbers should be used in tests configure:3323: result: yes configure:3337: checking where to put large temp files if large file tests are run configure:3346: result: . configure:3357: checking whether a win32 DLL is desired configure:3365: result: no configure:3389: checking whether separate fortran libs are desired configure:3398: result: no configure:3468: finding C compiler configure:3525: checking for xlc configure:3555: result: no configure:3525: checking for cc configure:3541: found /usr/bin/cc configure:3552: result: cc configure:3588: checking for C compiler version configure:3596: cc --version >&5 cc (GCC) 4.1.2 20070925 (Red Hat 4.1.2-27) Copyright (C) 2006 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:3600: $? = 0 configure:3607: cc -v >&5 Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --enable-plugin --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-cpu=generic --host=x86_64-redhat-linux Thread model: posix gcc version 4.1.2 20070925 (Red Hat 4.1.2-27) configure:3611: $? = 0 configure:3618: cc -V >&5 cc: '-V' option must have argument configure:3622: $? = 1 configure:3645: checking for C compiler default output file name configure:3667: cc conftest.c >&5 configure:3671: $? = 0 configure:3709: result: a.out configure:3726: checking whether the C compiler works configure:3736: ./a.out configure:3740: $? = 0 configure:3757: result: yes configure:3764: checking whether we are cross compiling configure:3766: result: no configure:3769: checking for suffix of executables configure:3776: cc -o conftest conftest.c >&5 configure:3780: $? = 0 configure:3804: result: configure:3810: checking for suffix of object files configure:3836: cc -c conftest.c >&5 configure:3840: $? = 0 configure:3863: result: o configure:3867: checking whether we are using the GNU C compiler configure:3896: cc -c conftest.c >&5 configure:3903: $? = 0 configure:3920: result: yes configure:3929: checking whether cc accepts -g configure:3959: cc -c -g conftest.c >&5 configure:3966: $? = 0 configure:4067: result: yes configure:4084: checking for cc option to accept ISO C89 configure:4158: cc -c -g -O2 conftest.c >&5 configure:4165: $? = 0 configure:4188: result: none needed configure:4217: checking for style of include used by make configure:4245: result: GNU configure:4270: checking dependency style of cc configure:4361: result: gcc3 configure:4380: checking whether cc understands -c and -o together configure:4412: cc -c conftest.c -o conftest2.o >&5 configure:4416: $? = 0 configure:4422: cc -c conftest.c -o conftest2.o >&5 configure:4426: $? = 0 configure:4481: result: yes configure:4508: checking for an ANSI C-conforming const configure:4583: cc -c -g -O2 conftest.c >&5 configure:4590: $? = 0 configure:4605: result: yes configure:4636: finding Fortran compiler (will not be used if Fortran API is not desired) configure:4975: checking for xlf90 configure:5005: result: no configure:4975: checking for fort configure:5005: result: no configure:4975: checking for xlf95 configure:5005: result: no configure:4975: checking for ifort configure:5005: result: no configure:4975: checking for ifc configure:5005: result: no configure:4975: checking for efc configure:5005: result: no configure:4975: checking for pgf95 configure:5005: result: no configure:4975: checking for lf95 configure:5005: result: no configure:4975: checking for gfortran configure:4991: found /usr/bin/gfortran configure:5002: result: gfortran configure:5032: checking for Fortran compiler version configure:5040: gfortran --version >&5 GNU Fortran (GCC) 4.1.2 20070925 (Red Hat 4.1.2-27) Copyright (C) 2007 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:5044: $? = 0 configure:5051: gfortran -v >&5 Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --enable-plugin --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-cpu=generic --host=x86_64-redhat-linux Thread model: posix gcc version 4.1.2 20070925 (Red Hat 4.1.2-27) configure:5055: $? = 0 configure:5062: gfortran -V >&5 gfortran: '-V' option must have argument configure:5066: $? = 1 configure:5074: checking whether we are using the GNU Fortran compiler configure:5093: gfortran -c conftest.F >&5 configure:5100: $? = 0 configure:5117: result: yes configure:5123: checking whether gfortran accepts -g configure:5140: gfortran -c -g conftest.f >&5 configure:5147: $? = 0 configure:5163: result: yes configure:5256: checking for xlf configure:5286: result: no configure:5256: checking for fort configure:5286: result: no configure:5256: checking for xlf95 configure:5286: result: no configure:5256: checking for ifort configure:5286: result: no configure:5256: checking for ifc configure:5286: result: no configure:5256: checking for efc configure:5286: result: no configure:5256: checking for pgf77 configure:5286: result: no configure:5256: checking for lf95 configure:5286: result: no configure:5256: checking for gfortran configure:5272: found /usr/bin/gfortran configure:5283: result: gfortran configure:5313: checking for Fortran 77 compiler version configure:5321: gfortran --version >&5 GNU Fortran (GCC) 4.1.2 20070925 (Red Hat 4.1.2-27) Copyright (C) 2007 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:5325: $? = 0 configure:5332: gfortran -v >&5 Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --enable-plugin --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-cpu=generic --host=x86_64-redhat-linux Thread model: posix gcc version 4.1.2 20070925 (Red Hat 4.1.2-27) configure:5336: $? = 0 configure:5343: gfortran -V >&5 gfortran: '-V' option must have argument configure:5347: $? = 1 configure:5355: checking whether we are using the GNU Fortran 77 compiler configure:5374: gfortran -c conftest.F >&5 configure:5381: $? = 0 configure:5398: result: yes configure:5404: checking whether gfortran accepts -g configure:5421: gfortran -c -g conftest.f >&5 configure:5428: $? = 0 configure:5444: result: yes configure:5744: finding C++ compiler (will not be used if C++ API is not desired) configure:5811: checking for cl configure:5841: result: no configure:5811: checking for KCC configure:5841: result: no configure:5811: checking for CC configure:5841: result: no configure:5811: checking for cxx configure:5841: result: no configure:5811: checking for cc++ configure:5841: result: no configure:5811: checking for xlC configure:5841: result: no configure:5811: checking for aCC configure:5841: result: no configure:5811: checking for c++ configure:5827: found /usr/local/bin/c++ configure:5838: result: c++ configure:5869: checking for C++ compiler version configure:5877: c++ --version >&5 c++ (GCC) 4.1.0 Copyright (C) 2006 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:5881: $? = 0 configure:5888: c++ -v >&5 Using built-in specs. Target: x86_64-unknown-linux-gnu Configured with: ../gcc-4.1.0/configure --enable-languages=c,c++,fortran Thread model: posix gcc version 4.1.0 configure:5892: $? = 0 configure:5899: c++ -V >&5 c++: '-V' option must have argument configure:5903: $? = 1 configure:5906: checking whether we are using the GNU C++ compiler configure:5935: c++ -c conftest.cpp >&5 configure:5942: $? = 0 configure:5959: result: yes configure:5968: checking whether c++ accepts -g configure:5998: c++ -c -g conftest.cpp >&5 configure:6005: $? = 0 configure:6106: result: yes configure:6131: checking dependency style of c++ configure:6222: result: gcc3 configure:6295: setting up libtool configure:6323: checking for a sed that does not truncate output configure:6389: result: /bin/sed configure:6407: checking for grep that handles long lines and -e configure:6467: result: /bin/grep configure:6472: checking for egrep configure:6536: result: /bin/grep -E configure:6541: checking for fgrep configure:6605: result: /bin/grep -F configure:6640: checking for ld used by cc configure:6707: result: /usr/bin/ld configure:6716: checking if the linker (/usr/bin/ld) is GNU ld configure:6731: result: yes configure:6743: checking for BSD- or MS-compatible name lister (nm) configure:6792: result: /usr/bin/nm -B configure:6914: checking the name lister (/usr/bin/nm -B) interface configure:6921: cc -c -g -O2 conftest.c >&5 configure:6924: /usr/bin/nm -B "conftest.o" configure:6927: output 0000000000000000 B some_variable configure:6934: result: BSD nm configure:6937: checking whether ln -s works configure:6941: result: yes configure:6949: checking the maximum length of command line arguments configure:7069: result: 98304 configure:7086: checking whether the shell understands some XSI constructs configure:7094: result: yes configure:7098: checking whether the shell understands "+=" configure:7104: result: yes configure:7139: checking for /usr/bin/ld option to reload object files configure:7146: result: -r configure:7173: checking how to recognize dependent libraries configure:7363: result: pass_all configure:7423: checking for ar configure:7439: found /usr/bin/ar configure:7450: result: ar configure:7532: checking for strip configure:7548: found /usr/bin/strip configure:7559: result: strip configure:7635: checking for ranlib configure:7651: found /usr/bin/ranlib configure:7662: result: ranlib configure:7756: checking command to parse /usr/bin/nm -B output from cc object configure:7874: cc -c -g -O2 conftest.c >&5 configure:7877: $? = 0 configure:7881: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' \> conftest.nm configure:7884: $? = 0 configure:7938: cc -o conftest -g -O2 conftest.c conftstm.o >&5 configure:7941: $? = 0 configure:7979: result: ok configure:8074: cc -c -g -O2 conftest.c >&5 configure:8077: $? = 0 configure:8562: checking how to run the C preprocessor configure:8602: cc -E conftest.c configure:8609: $? = 0 configure:8640: cc -E conftest.c conftest.c:12:28: error: ac_nonexistent.h: No such file or directory configure:8647: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "3.6.3-snapshot2008063023" | #define PACKAGE_STRING "netCDF 3.6.3-snapshot2008063023" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "3.6.3-snapshot2008063023" | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | /* end confdefs.h. */ | #include configure:8680: result: cc -E configure:8709: cc -E conftest.c configure:8716: $? = 0 configure:8747: cc -E conftest.c conftest.c:12:28: error: ac_nonexistent.h: No such file or directory configure:8754: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "3.6.3-snapshot2008063023" | #define PACKAGE_STRING "netCDF 3.6.3-snapshot2008063023" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "3.6.3-snapshot2008063023" | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | /* end confdefs.h. */ | #include configure:8792: checking for ANSI C header files configure:8822: cc -c -g -O2 conftest.c >&5 configure:8829: $? = 0 configure:8928: cc -o conftest -g -O2 conftest.c >&5 configure:8932: $? = 0 configure:8938: ./conftest configure:8942: $? = 0 configure:8960: result: yes configure:8984: checking for sys/types.h configure:9005: cc -c -g -O2 conftest.c >&5 configure:9012: $? = 0 configure:9029: result: yes configure:8984: checking for sys/stat.h configure:9005: cc -c -g -O2 conftest.c >&5 configure:9012: $? = 0 configure:9029: result: yes configure:8984: checking for stdlib.h configure:9005: cc -c -g -O2 conftest.c >&5 configure:9012: $? = 0 configure:9029: result: yes configure:8984: checking for string.h configure:9005: cc -c -g -O2 conftest.c >&5 configure:9012: $? = 0 configure:9029: result: yes configure:8984: checking for memory.h configure:9005: cc -c -g -O2 conftest.c >&5 configure:9012: $? = 0 configure:9029: result: yes configure:8984: checking for strings.h configure:9005: cc -c -g -O2 conftest.c >&5 configure:9012: $? = 0 configure:9029: result: yes configure:8984: checking for inttypes.h configure:9005: cc -c -g -O2 conftest.c >&5 configure:9012: $? = 0 configure:9029: result: yes configure:8984: checking for stdint.h configure:9005: cc -c -g -O2 conftest.c >&5 configure:9012: $? = 0 configure:9029: result: yes configure:8984: checking for unistd.h configure:9005: cc -c -g -O2 conftest.c >&5 configure:9012: $? = 0 configure:9029: result: yes configure:9046: checking for dlfcn.h configure:9067: cc -c -g -O2 conftest.c >&5 configure:9074: $? = 0 configure:9091: result: yes configure:9221: checking for C++ compiler version configure:9229: c++ --version >&5 c++ (GCC) 4.1.0 Copyright (C) 2006 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:9233: $? = 0 configure:9240: c++ -v >&5 Using built-in specs. Target: x86_64-unknown-linux-gnu Configured with: ../gcc-4.1.0/configure --enable-languages=c,c++,fortran Thread model: posix gcc version 4.1.0 configure:9244: $? = 0 configure:9251: c++ -V >&5 c++: '-V' option must have argument configure:9255: $? = 1 configure:9258: checking whether we are using the GNU C++ compiler configure:9311: result: yes configure:9320: checking whether c++ accepts -g configure:9458: result: yes configure:9483: checking dependency style of c++ configure:9574: result: gcc3 configure:9597: checking how to run the C++ preprocessor configure:9633: c++ -E conftest.cpp configure:9640: $? = 0 configure:9671: c++ -E conftest.cpp conftest.cpp:23:28: error: ac_nonexistent.h: No such file or directory configure:9678: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "3.6.3-snapshot2008063023" | #define PACKAGE_STRING "netCDF 3.6.3-snapshot2008063023" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "3.6.3-snapshot2008063023" | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | /* end confdefs.h. */ | #include configure:9711: result: c++ -E configure:9740: c++ -E conftest.cpp configure:9747: $? = 0 configure:9778: c++ -E conftest.cpp conftest.cpp:23:28: error: ac_nonexistent.h: No such file or directory configure:9785: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "3.6.3-snapshot2008063023" | #define PACKAGE_STRING "netCDF 3.6.3-snapshot2008063023" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "3.6.3-snapshot2008063023" | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | /* end confdefs.h. */ | #include configure:9936: checking for Fortran 77 compiler version configure:9944: gfortran --version >&5 GNU Fortran (GCC) 4.1.2 20070925 (Red Hat 4.1.2-27) Copyright (C) 2007 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:9948: $? = 0 configure:9955: gfortran -v >&5 Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --enable-plugin --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-cpu=generic --host=x86_64-redhat-linux Thread model: posix gcc version 4.1.2 20070925 (Red Hat 4.1.2-27) configure:9959: $? = 0 configure:9966: gfortran -V >&5 gfortran: '-V' option must have argument configure:9970: $? = 1 configure:9978: checking whether we are using the GNU Fortran 77 compiler configure:10021: result: yes configure:10027: checking whether gfortran accepts -g configure:10067: result: yes configure:10214: checking for Fortran compiler version configure:10222: gfortran --version >&5 GNU Fortran (GCC) 4.1.2 20070925 (Red Hat 4.1.2-27) Copyright (C) 2007 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:10226: $? = 0 configure:10233: gfortran -v >&5 Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --enable-plugin --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-cpu=generic --host=x86_64-redhat-linux Thread model: posix gcc version 4.1.2 20070925 (Red Hat 4.1.2-27) configure:10237: $? = 0 configure:10244: gfortran -V >&5 gfortran: '-V' option must have argument configure:10248: $? = 1 configure:10256: checking whether we are using the GNU Fortran compiler configure:10299: result: yes configure:10305: checking whether gfortran accepts -g configure:10345: result: yes configure:10827: checking for objdir configure:10842: result: .libs configure:11134: checking if cc supports -fno-rtti -fno-exceptions configure:11152: cc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5 cc1: warning: command line option "-fno-rtti" is valid for C++/ObjC++ but not for C configure:11156: $? = 0 configure:11169: result: no configure:11189: checking for cc option to produce PIC configure:11446: result: -fPIC -DPIC configure:11458: checking if cc PIC flag -fPIC -DPIC works configure:11476: cc -c -g -O2 -fPIC -DPIC -DPIC conftest.c >&5 configure:11480: $? = 0 configure:11493: result: yes configure:11517: checking if cc static flag -static works configure:11545: result: yes configure:11560: checking if cc supports -c -o file.o configure:11581: cc -c -g -O2 -o out/conftest2.o conftest.c >&5 configure:11585: $? = 0 configure:11607: result: yes configure:11615: checking if cc supports -c -o file.o configure:11662: result: yes configure:11695: checking whether the cc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:12761: result: yes configure:13000: checking dynamic linker characteristics configure:13443: cc -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.c >&5 configure:13450: $? = 0 configure:13683: result: GNU/Linux ld.so configure:13785: checking how to hardcode library paths into programs configure:13810: result: immediate configure:14651: checking whether stripping libraries is possible configure:14656: result: yes configure:14691: checking if libtool supports shared libraries configure:14693: result: yes configure:14696: checking whether to build shared libraries configure:14717: result: no configure:14720: checking whether to build static libraries configure:14724: result: yes configure:14874: checking for ld used by c++ configure:14941: result: /usr/bin/ld -m elf_x86_64 configure:14950: checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld configure:14965: result: yes configure:15020: checking whether the c++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:15990: result: yes configure:16018: c++ -c -g -O2 conftest.cpp >&5 configure:16021: $? = 0 configure:16203: checking for c++ option to produce PIC configure:16512: result: -fPIC -DPIC configure:16521: checking if c++ PIC flag -fPIC -DPIC works configure:16539: c++ -c -g -O2 -fPIC -DPIC -DPIC conftest.cpp >&5 configure:16543: $? = 0 configure:16556: result: yes configure:16577: checking if c++ static flag -static works configure:16605: result: yes configure:16617: checking if c++ supports -c -o file.o configure:16638: c++ -c -g -O2 -o out/conftest2.o conftest.cpp >&5 configure:16642: $? = 0 configure:16664: result: yes configure:16669: checking if c++ supports -c -o file.o configure:16716: result: yes configure:16746: checking whether the c++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:16772: result: yes configure:16909: checking dynamic linker characteristics configure:17300: c++ -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.cpp >&5 configure:17307: $? = 0 configure:17540: result: GNU/Linux ld.so configure:17591: checking how to hardcode library paths into programs configure:17616: result: immediate configure:17757: checking if libtool supports shared libraries configure:17759: result: yes configure:17762: checking whether to build shared libraries configure:17782: result: no configure:17785: checking whether to build static libraries configure:17789: result: yes configure:17803: checking for gfortran option to produce PIC configure:18060: result: -fPIC configure:18069: checking if gfortran PIC flag -fPIC works configure:18087: gfortran -c -g -O2 -fPIC conftest.f >&5 configure:18091: $? = 0 configure:18104: result: yes configure:18125: checking if gfortran static flag -static works configure:18153: result: yes configure:18165: checking if gfortran supports -c -o file.o configure:18186: gfortran -c -g -O2 -o out/conftest2.o conftest.f >&5 configure:18190: $? = 0 configure:18212: result: yes configure:18217: checking if gfortran supports -c -o file.o configure:18264: result: yes configure:18294: checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:19340: result: yes configure:19477: checking dynamic linker characteristics configure:19858: gfortran -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.f >&5 configure:19865: $? = 0 configure:20098: result: GNU/Linux ld.so configure:20149: checking how to hardcode library paths into programs configure:20174: result: immediate configure:20310: checking if libtool supports shared libraries configure:20312: result: yes configure:20315: checking whether to build shared libraries configure:20335: result: no configure:20338: checking whether to build static libraries configure:20342: result: yes configure:20368: gfortran -c -g -O2 conftest.f >&5 configure:20371: $? = 0 configure:20481: checking for gfortran option to produce PIC configure:20738: result: -fPIC configure:20747: checking if gfortran PIC flag -fPIC works configure:20765: gfortran -c -g -O2 -fPIC conftest.f >&5 configure:20769: $? = 0 configure:20782: result: yes configure:20803: checking if gfortran static flag -static works configure:20831: result: yes configure:20843: checking if gfortran supports -c -o file.o configure:20864: gfortran -c -g -O2 -o out/conftest2.o conftest.f >&5 configure:20868: $? = 0 configure:20890: result: yes configure:20895: checking if gfortran supports -c -o file.o configure:20942: result: yes configure:20972: checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:22018: result: yes configure:22155: checking dynamic linker characteristics configure:22536: gfortran -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.f >&5 configure:22543: $? = 0 configure:22776: result: GNU/Linux ld.so configure:22827: checking how to hardcode library paths into programs configure:22852: result: immediate configure:22900: finding other utilities configure:22917: checking for a BSD-compatible install configure:22985: result: /usr/bin/install -c configure:23051: trying to set flags for this platform configure:23056: checking if _HPUX_SOURCE should be set configure:23072: result: no configure:23077: checking if Solaris -Xa option is needed configure:23090: result: CFLAGS=-g -O2 configure:23116: checking if we need to set _LARGE_FILES despite results of previous tests configure:23147: result: _LARGE_FILES= configure:23157: checking for special C compiler options needed for large files configure:23252: result: no configure:23258: checking for _FILE_OFFSET_BITS value needed for large files configure:23293: cc -c -g -O2 conftest.c >&5 configure:23300: $? = 0 configure:23369: result: no configure:23507: displaying some results configure:23513: checking CPPFLAGS configure:23515: result: configure:23517: checking CC CFLAGS configure:23519: result: cc -g -O2 configure:23522: checking type cc configure:23524: result: cc is /usr/bin/cc configure:23527: checking CXX configure:23530: result: c++ configure:23532: checking CXXFLAGS configure:23534: result: -g -O2 configure:23537: checking type c++ configure:23539: result: c++ is /usr/local/bin/c++ configure:23546: checking FC configure:23549: result: gfortran configure:23551: checking FFLAGS configure:23553: result: -g -O2 configure:23556: checking type gfortran configure:23558: result: gfortran is /usr/bin/gfortran configure:23565: checking F90 configure:23580: result: unset configure:23584: checking AR configure:23587: result: ar configure:23589: checking AR_FLAGS configure:23591: result: cru configure:23594: checking type ar configure:23596: result: ar is /usr/bin/ar configure:23603: checking NM configure:23606: result: /usr/bin/nm -B configure:23608: checking NMFLAGS configure:23610: result: configure:24740: checking types, headers, and functions configure:24744: checking for stdlib.h configure:24749: result: yes configure:24887: checking for sys/types.h configure:24892: result: yes configure:25031: checking for stdbool.h that conforms to C99 configure:25126: cc -c -g -O2 conftest.c >&5 configure:25133: $? = 0 configure:25148: result: yes configure:25150: checking for _Bool configure:25178: cc -c -g -O2 conftest.c >&5 configure:25185: $? = 0 configure:25212: cc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:60: error: expected expression before ')' token configure:25219: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "3.6.3-snapshot2008063023" | #define PACKAGE_STRING "netCDF 3.6.3-snapshot2008063023" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "3.6.3-snapshot2008063023" | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((_Bool))) | return 0; | ; | return 0; | } configure:25242: result: yes configure:25268: checking for strlcat configure:25324: cc -o conftest -g -O2 conftest.c >&5 /tmp/cceFTgDU.o: In function `main': /shecky/n362_test/conftest.c:60: undefined reference to `strlcat' collect2: ld returned 1 exit status configure:25331: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "3.6.3-snapshot2008063023" | #define PACKAGE_STRING "netCDF 3.6.3-snapshot2008063023" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "3.6.3-snapshot2008063023" | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | /* end confdefs.h. */ | /* Define strlcat to an innocuous variant, in case declares strlcat. | For example, HP-UX 11i declares gettimeofday. */ | #define strlcat innocuous_strlcat | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char strlcat (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef strlcat | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char strlcat (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_strlcat || defined __stub___strlcat | choke me | #endif | | int | main () | { | return strlcat (); | ; | return 0; | } configure:25353: result: no configure:25268: checking for strerror configure:25324: cc -o conftest -g -O2 conftest.c >&5 configure:25331: $? = 0 configure:25353: result: yes configure:25366: checking for working alloca.h configure:25393: cc -o conftest -g -O2 conftest.c >&5 configure:25400: $? = 0 configure:25420: result: yes configure:25430: checking for alloca configure:25477: cc -o conftest -g -O2 conftest.c >&5 configure:25484: $? = 0 configure:25504: result: yes configure:25740: checking whether isnan is declared configure:25770: cc -c -g -O2 conftest.c >&5 configure:25777: $? = 0 configure:25792: result: yes configure:25808: checking whether isinf is declared configure:25838: cc -c -g -O2 conftest.c >&5 configure:25845: $? = 0 configure:25860: result: yes configure:25876: checking whether isfinite is declared configure:25906: cc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:37: error: 'isfinite' undeclared (first use in this function) conftest.c:37: error: (Each undeclared identifier is reported only once conftest.c:37: error: for each function it appears in.) configure:25913: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "3.6.3-snapshot2008063023" | #define PACKAGE_STRING "netCDF 3.6.3-snapshot2008063023" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "3.6.3-snapshot2008063023" | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | /* end confdefs.h. */ | #include | | int | main () | { | #ifndef isfinite | (void) isfinite; | #endif | | ; | return 0; | } configure:25928: result: no configure:25944: checking whether signbit is declared configure:25974: cc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:38: error: 'signbit' undeclared (first use in this function) conftest.c:38: error: (Each undeclared identifier is reported only once conftest.c:38: error: for each function it appears in.) configure:25981: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "3.6.3-snapshot2008063023" | #define PACKAGE_STRING "netCDF 3.6.3-snapshot2008063023" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "3.6.3-snapshot2008063023" | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 0 | /* end confdefs.h. */ | #include | | int | main () | { | #ifndef signbit | (void) signbit; | #endif | | ; | return 0; | } configure:25996: result: no configure:26264: checking for struct stat.st_blksize configure:26292: cc -c -g -O2 conftest.c >&5 configure:26299: $? = 0 configure:26357: result: yes configure:26374: checking for IEEE floating point format configure:26422: cc -o conftest -g -O2 conftest.c >&5 configure:26426: $? = 0 configure:26432: ./conftest configure:26436: $? = 0 configure:26452: result: yes configure:26462: checking for size_t configure:26490: cc -c -g -O2 conftest.c >&5 configure:26497: $? = 0 configure:26524: cc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:71: error: expected expression before ')' token configure:26531: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "3.6.3-snapshot2008063023" | #define PACKAGE_STRING "netCDF 3.6.3-snapshot2008063023" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "3.6.3-snapshot2008063023" | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 0 | #define HAVE_DECL_SIGNBIT 0 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:26554: result: yes configure:26566: checking for off_t configure:26594: cc -c -g -O2 conftest.c >&5 configure:26601: $? = 0 configure:26628: cc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:71: error: expected expression before ')' token configure:26635: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "3.6.3-snapshot2008063023" | #define PACKAGE_STRING "netCDF 3.6.3-snapshot2008063023" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "3.6.3-snapshot2008063023" | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 0 | #define HAVE_DECL_SIGNBIT 0 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((off_t))) | return 0; | ; | return 0; | } configure:26658: result: yes configure:26670: checking for ssize_t configure:26698: cc -c -g -O2 conftest.c >&5 configure:26705: $? = 0 configure:26732: cc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:71: error: expected expression before ')' token configure:26739: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "3.6.3-snapshot2008063023" | #define PACKAGE_STRING "netCDF 3.6.3-snapshot2008063023" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "3.6.3-snapshot2008063023" | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 0 | #define HAVE_DECL_SIGNBIT 0 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((ssize_t))) | return 0; | ; | return 0; | } configure:26762: result: yes configure:26772: checking for ptrdiff_t configure:26800: cc -c -g -O2 conftest.c >&5 configure:26807: $? = 0 configure:26834: cc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:72: error: expected expression before ')' token configure:26841: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "3.6.3-snapshot2008063023" | #define PACKAGE_STRING "netCDF 3.6.3-snapshot2008063023" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "3.6.3-snapshot2008063023" | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 0 | #define HAVE_DECL_SIGNBIT 0 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((ptrdiff_t))) | return 0; | ; | return 0; | } configure:26864: result: yes configure:26874: checking for uchar configure:26902: cc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:73: error: 'uchar' undeclared (first use in this function) conftest.c:73: error: (Each undeclared identifier is reported only once conftest.c:73: error: for each function it appears in.) configure:26909: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "3.6.3-snapshot2008063023" | #define PACKAGE_STRING "netCDF 3.6.3-snapshot2008063023" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "3.6.3-snapshot2008063023" | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 0 | #define HAVE_DECL_SIGNBIT 0 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof (uchar)) | return 0; | ; | return 0; | } configure:26966: result: no configure:26981: checking whether char is unsigned configure:27009: cc -c -g -O2 conftest.c >&5 configure:27016: $? = 0 configure:27031: result: no configure:27041: checking whether byte ordering is bigendian configure:27066: cc -c -g -O2 conftest.c >&5 conftest.c:38: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'is' configure:27073: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "3.6.3-snapshot2008063023" | #define PACKAGE_STRING "netCDF 3.6.3-snapshot2008063023" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "3.6.3-snapshot2008063023" | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 0 | #define HAVE_DECL_SIGNBIT 0 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | /* end confdefs.h. */ | #if ! (defined __BIG_ENDIAN__ || defined __LITTLE_ENDIAN__) | neither is defined; | #endif | typedef int dummy; | configure:27117: cc -c -g -O2 conftest.c >&5 configure:27124: $? = 0 configure:27156: cc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:44: error: 'not' undeclared (first use in this function) conftest.c:44: error: (Each undeclared identifier is reported only once conftest.c:44: error: for each function it appears in.) conftest.c:44: error: expected ';' before 'big' configure:27163: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "3.6.3-snapshot2008063023" | #define PACKAGE_STRING "netCDF 3.6.3-snapshot2008063023" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "3.6.3-snapshot2008063023" | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 0 | #define HAVE_DECL_SIGNBIT 0 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | /* end confdefs.h. */ | #include | #include | | int | main () | { | #if BYTE_ORDER != BIG_ENDIAN | not big endian | #endif | | ; | return 0; | } configure:27415: result: no configure:27439: checking size of short configure:27742: cc -o conftest -g -O2 conftest.c >&5 configure:27746: $? = 0 configure:27752: ./conftest configure:27756: $? = 0 configure:27780: result: 2 configure:27794: checking size of int configure:28097: cc -o conftest -g -O2 conftest.c >&5 configure:28101: $? = 0 configure:28107: ./conftest configure:28111: $? = 0 configure:28135: result: 4 configure:28149: checking size of long configure:28452: cc -o conftest -g -O2 conftest.c >&5 configure:28456: $? = 0 configure:28462: ./conftest configure:28466: $? = 0 configure:28490: result: 8 configure:28504: checking size of float configure:28807: cc -o conftest -g -O2 conftest.c >&5 configure:28811: $? = 0 configure:28817: ./conftest configure:28821: $? = 0 configure:28845: result: 4 configure:28859: checking size of double configure:29162: cc -o conftest -g -O2 conftest.c >&5 configure:29166: $? = 0 configure:29172: ./conftest configure:29176: $? = 0 configure:29200: result: 8 configure:29214: checking size of off_t configure:29517: cc -o conftest -g -O2 conftest.c >&5 configure:29521: $? = 0 configure:29527: ./conftest configure:29531: $? = 0 configure:29555: result: 8 configure:29569: checking size of size_t configure:29872: cc -o conftest -g -O2 conftest.c >&5 configure:29876: $? = 0 configure:29882: ./conftest configure:29886: $? = 0 configure:29910: result: 8 configure:30009: checking for manual-page index command configure:30011: result: configure:30022: checking what to call the output of the ftpbin target configure:30031: result: binary-netcdf-3.6.3-snapshot2008063023_nc3.tar gfortran c++ configure:30034: checking binary distribution directory configure:30042: result: /home/ftp/pub/binary/linux_2.6-x86_64 configure:30701: checking for gawk configure:30728: result: gawk configure:30743: checking for flex configure:30759: found /usr/bin/flex configure:30770: result: flex configure:30807: flex conftest.l configure:30811: $? = 0 configure:30813: checking lex output file root configure:30829: result: lex.yy configure:30834: checking lex library configure:30853: cc -o conftest -g -O2 conftest.c >&5 /tmp/ccd4rRZt.o: In function `input': /shecky/n362_test/lex.yy.c:1133: undefined reference to `yywrap' /tmp/ccd4rRZt.o: In function `yylex': /shecky/n362_test/lex.yy.c:840: undefined reference to `yywrap' /tmp/ccd4rRZt.o: In function `main': /shecky/n362_test/conftest.l:17: undefined reference to `yywrap' collect2: ld returned 1 exit status configure:30860: $? = 1 configure: failed program was: | | #line 3 "lex.yy.c" | | #define YY_INT_ALIGNED short int | | /* A lexical scanner generated by flex */ | | #define FLEX_SCANNER | #define YY_FLEX_MAJOR_VERSION 2 | #define YY_FLEX_MINOR_VERSION 5 | #define YY_FLEX_SUBMINOR_VERSION 33 | #if YY_FLEX_SUBMINOR_VERSION > 0 | #define FLEX_BETA | #endif | | /* First, we deal with platform-specific or compiler-specific issues. */ | | /* begin standard C headers. */ | #include | #include | #include | #include | | /* end standard C headers. */ | | /* flex integer type definitions */ | | #ifndef FLEXINT_H | #define FLEXINT_H | | /* C99 systems have . Non-C99 systems may or may not. */ | | #if __STDC_VERSION__ >= 199901L | | /* C99 says to define __STDC_LIMIT_MACROS before including stdint.h, | * if you want the limit (max/min) macros for int types. | */ | #ifndef __STDC_LIMIT_MACROS | #define __STDC_LIMIT_MACROS 1 | #endif | | #include | typedef int8_t flex_int8_t; | typedef uint8_t flex_uint8_t; | typedef int16_t flex_int16_t; | typedef uint16_t flex_uint16_t; | typedef int32_t flex_int32_t; | typedef uint32_t flex_uint32_t; | #else | typedef signed char flex_int8_t; | typedef short int flex_int16_t; | typedef int flex_int32_t; | typedef unsigned char flex_uint8_t; | typedef unsigned short int flex_uint16_t; | typedef unsigned int flex_uint32_t; | #endif /* ! C99 */ | | /* Limits of integral types. */ | #ifndef INT8_MIN | #define INT8_MIN (-128) | #endif | #ifndef INT16_MIN | #define INT16_MIN (-32767-1) | #endif | #ifndef INT32_MIN | #define INT32_MIN (-2147483647-1) | #endif | #ifndef INT8_MAX | #define INT8_MAX (127) | #endif | #ifndef INT16_MAX | #define INT16_MAX (32767) | #endif | #ifndef INT32_MAX | #define INT32_MAX (2147483647) | #endif | #ifndef UINT8_MAX | #define UINT8_MAX (255U) | #endif | #ifndef UINT16_MAX | #define UINT16_MAX (65535U) | #endif | #ifndef UINT32_MAX | #define UINT32_MAX (4294967295U) | #endif | | #endif /* ! FLEXINT_H */ | | #ifdef __cplusplus | | /* The "const" storage-class-modifier is valid. */ | #define YY_USE_CONST | | #else /* ! __cplusplus */ | | #if __STDC__ | | #define YY_USE_CONST | | #endif /* __STDC__ */ | #endif /* ! __cplusplus */ | | #ifdef YY_USE_CONST | #define yyconst const | #else | #define yyconst | #endif | | /* Returned upon end-of-file. */ | #define YY_NULL 0 | | /* Promotes a possibly negative, possibly signed char to an unsigned | * integer for use as an array index. If the signed char is negative, | * we want to instead treat it as an 8-bit unsigned char, hence the | * double cast. | */ | #define YY_SC_TO_UI(c) ((unsigned int) (unsigned char) c) | | /* Enter a start condition. This macro really ought to take a parameter, | * but we do it the disgusting crufty way forced on us by the ()-less | * definition of BEGIN. | */ | #define BEGIN (yy_start) = 1 + 2 * | | /* Translate the current start state into a value that can be later handed | * to BEGIN to return to the state. The YYSTATE alias is for lex | * compatibility. | */ | #define YY_START (((yy_start) - 1) / 2) | #define YYSTATE YY_START | | /* Action number for EOF rule of a given start state. */ | #define YY_STATE_EOF(state) (YY_END_OF_BUFFER + state + 1) | | /* Special action meaning "start processing a new file". */ | #define YY_NEW_FILE yyrestart(yyin ) | | #define YY_END_OF_BUFFER_CHAR 0 | | /* Size of default input buffer. */ | #ifndef YY_BUF_SIZE | #define YY_BUF_SIZE 16384 | #endif | | /* The state buf must be large enough to hold one state per character in the main buffer. | */ | #define YY_STATE_BUF_SIZE ((YY_BUF_SIZE + 2) * sizeof(yy_state_type)) | | #ifndef YY_TYPEDEF_YY_BUFFER_STATE | #define YY_TYPEDEF_YY_BUFFER_STATE | typedef struct yy_buffer_state *YY_BUFFER_STATE; | #endif | | extern int yyleng; | | extern FILE *yyin, *yyout; | | #define EOB_ACT_CONTINUE_SCAN 0 | #define EOB_ACT_END_OF_FILE 1 | #define EOB_ACT_LAST_MATCH 2 | | #define YY_LESS_LINENO(n) | | /* Return all but the first "n" matched characters back to the input stream. */ | #define yyless(n) \ | do \ | { \ | /* Undo effects of setting up yytext. */ \ | int yyless_macro_arg = (n); \ | YY_LESS_LINENO(yyless_macro_arg);\ | *yy_cp = (yy_hold_char); \ | YY_RESTORE_YY_MORE_OFFSET \ | (yy_c_buf_p) = yy_cp = yy_bp + yyless_macro_arg - YY_MORE_ADJ; \ | YY_DO_BEFORE_ACTION; /* set up yytext again */ \ | } \ | while ( 0 ) | | #define unput(c) yyunput( c, (yytext_ptr) ) | | /* The following is because we cannot portably get our hands on size_t | * (without autoconf's help, which isn't available because we want | * flex-generated scanners to compile on their own). | */ | | #ifndef YY_TYPEDEF_YY_SIZE_T | #define YY_TYPEDEF_YY_SIZE_T | typedef unsigned int yy_size_t; | #endif | | #ifndef YY_STRUCT_YY_BUFFER_STATE | #define YY_STRUCT_YY_BUFFER_STATE | struct yy_buffer_state | { | FILE *yy_input_file; | | char *yy_ch_buf; /* input buffer */ | char *yy_buf_pos; /* current position in input buffer */ | | /* Size of input buffer in bytes, not including room for EOB | * characters. | */ | yy_size_t yy_buf_size; | | /* Number of characters read into yy_ch_buf, not including EOB | * characters. | */ | int yy_n_chars; | | /* Whether we "own" the buffer - i.e., we know we created it, | * and can realloc() it to grow it, and should free() it to | * delete it. | */ | int yy_is_our_buffer; | | /* Whether this is an "interactive" input source; if so, and | * if we're using stdio for input, then we want to use getc() | * instead of fread(), to make sure we stop fetching input after | * each newline. | */ | int yy_is_interactive; | | /* Whether we're considered to be at the beginning of a line. | * If so, '^' rules will be active on the next match, otherwise | * not. | */ | int yy_at_bol; | | int yy_bs_lineno; /**< The line count. */ | int yy_bs_column; /**< The column count. */ | | /* Whether to try to fill the input buffer when we reach the | * end of it. | */ | int yy_fill_buffer; | | int yy_buffer_status; | | #define YY_BUFFER_NEW 0 | #define YY_BUFFER_NORMAL 1 | /* When an EOF's been seen but there's still some text to process | * then we mark the buffer as YY_EOF_PENDING, to indicate that we | * shouldn't try reading from the input source any more. We might | * still have a bunch of tokens to match, though, because of | * possible backing-up. | * | * When we actually see the EOF, we change the status to "new" | * (via yyrestart()), so