Linux shecky.unidata.ucar.edu 2.6.23.17-88.fc7 #1 SMP Thu May 15 00:02:29 EDT 2008 x86_64 x86_64 x86_64 GNU/Linux ./configure --enable-netcdf-4 --with-hdf5=/upc/share/ed/local/shecky --with-zlib=/upc/share/ed/local/shecky --enable-separate-fortran --with-netcdf-c-lib=/shecky/n4_test/install --disable-c --disable-cxx --prefix=/shecky/n4_test/install --disable-compiler-recover && make check check_install configure: netCDF 4.0-snapshot2008070100 checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes configure: checking user options checking whether CXX is set to ''... no checking whether FC is set to ''... no checking whether F90 is set to ''... no checking whether this is a netCDF-4.x build... yes configure: Processing NetCDF-4 options. checking whether netCDF-4 is to be built... yes checking whether DAP client is to be built... no checking whether new netCDF-4 C++ API is to be built... no checking whether HDF5 should do data conversions... no checking whether extra example tests should be run... no checking whether parallel IO tests should be run... no checking whether a location for the HDF5 library was specified... /upc/share/ed/local/shecky checking whether a location for the ZLIB library was specified... /upc/share/ed/local/shecky checking whether a location for the SZLIB library was specified... checking whether netCDF-4 logging is enabled... no checking whether netCDF extra tests should be run (developers only)... no checking whether documentation is to be installed... no checking whether Fortran compiler(s) should be tested during configure... yes checking whether configure should try to set compiler flags... yes checking whether FFIO will be used... no checking whether to skip C++, F77, or F90 APIs if compiler is broken... no checking whether only the C library is desired... no checking whether examples should be built... yes checking whether F77 API is desired... yes checking whether F90 API is desired... yes checking whether fortran type sizes should be checked... yes checking whether C API is desired... no checking where to get netCDF C-only library for separate fortran libraries... /shecky/n4_test/install checking whether CXX API is desired... no checking whether v2 netCDF API should be built... yes checking whether the ncgen/ncdump should be built... no checking whether large file (> 2GB) tests should be run... no checking whether benchmaks should be run (experimental)... no checking whether extreme numbers should be used in tests... yes checking where to put large temp files if large file tests are run... . checking whether a win32 DLL is desired... no checking whether separate fortran libs are desired... yes configure: finding C compiler checking for xlc... no checking for cc... cc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of cc... gcc3 checking whether cc understands -c and -o together... yes checking for an ANSI C-conforming const... yes configure: finding Fortran compiler (will not be used if Fortran API is not desired) checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes configure: setting up Fortran 90 checking for Fortran flag to compile .f90 files... none checking fortran 90 modules inclusion flag... -I checking if Fortran compiler can handle Fortran-90... yes configure: finding C++ compiler (will not be used if C++ API is not desired) checking for cl... no checking for KCC... no checking for CC... no checking for cxx... no checking for cc++... no checking for xlC... no checking for aCC... no checking for c++... c++ checking whether we are using the GNU C++ compiler... yes checking whether c++ accepts -g... yes checking dependency style of c++... gcc3 configure: setting up libtool checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by cc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 98304 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking for /usr/bin/ld option to reload object files... -r checking how to recognize dependent libraries... pass_all checking for ar... ar checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from cc object... ok checking how to run the C preprocessor... cc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking whether we are using the GNU C++ compiler... (cached) yes checking whether c++ accepts -g... (cached) yes checking dependency style of c++... (cached) gcc3 checking how to run the C++ preprocessor... c++ -E checking whether we are using the GNU Fortran 77 compiler... (cached) yes checking whether gfortran accepts -g... (cached) yes checking whether we are using the GNU Fortran compiler... (cached) yes checking whether gfortran accepts -g... (cached) yes checking for objdir... .libs checking if cc supports -fno-rtti -fno-exceptions... no checking for cc option to produce PIC... -fPIC -DPIC checking if cc PIC flag -fPIC -DPIC works... yes checking if cc static flag -static works... yes checking if cc supports -c -o file.o... yes checking if cc supports -c -o file.o... (cached) yes checking whether the cc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for ld used by c++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the c++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for c++ option to produce PIC... -fPIC -DPIC checking if c++ PIC flag -fPIC -DPIC works... yes checking if c++ static flag -static works... yes checking if c++ supports -c -o file.o... yes checking if c++ supports -c -o file.o... (cached) yes checking whether the c++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate configure: finding other utilities checking for a BSD-compatible install... /usr/bin/install -c configure: trying to set fortran flags for this platform GNU Fortran (GCC) 4.1.2 20070925 (Red Hat 4.1.2-27) configure: trying to set flags for this platform checking if _HPUX_SOURCE should be set... no checking if Solaris -Xa option is needed... CFLAGS=-g -O2 configure: trying to set fortran 90 flags for this platform checking if we need to add to FFLAGS for ifort compiler... FFLAGS=-g -O2 checking if we need to set _LARGE_FILES despite results of previous tests... _LARGE_FILES= checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no configure: displaying some results checking CPPFLAGS... checking CC CFLAGS... cc -g -O2 checking type cc... cc is /usr/bin/cc checking CXX... c++ checking CXXFLAGS... -g -O2 checking type c++... c++ is /usr/local/bin/c++ checking FC... gfortran checking FFLAGS... -g -O2 checking type gfortran... gfortran is /usr/bin/gfortran checking F90... gfortran checking F90FLAGS... checking type gfortran... gfortran is /usr/bin/gfortran checking AR... ar checking AR_FLAGS... cru checking type ar... ar is /usr/bin/ar checking NM... /usr/bin/nm -B checking NMFLAGS... checking for /usr/bin/nm... /usr/bin/nm -B checking nm flags... checking for C-equivalent to Fortran routine "SUB"... sub_ checking for Fortran "byte"... yes checking for Fortran "integer*2"... yes checking if Fortran "byte" is C "signed char"... yes checking if Fortran "byte" is C "short"... no checking if Fortran "byte" is C "int"... no checking if Fortran "byte" is C "long"... no checking if Fortran "integer*2" is C "short"... yes checking if Fortran "integer*2" is C "int"... no checking if Fortran "integer*2" is C "long"... no checking if Fortran "integer" is C "int"... yes checking if Fortran "real" is C "float"... yes checking if Fortran "doubleprecision" is C "double"... yes checking for Fortran-equivalent to netCDF "byte"... byte checking for Fortran-equivalent to netCDF "short"... integer*2 checking if Fortran 90 compiler capitalizes .mod filenames... no configure: checking types, headers, and functions checking for stdlib.h... (cached) yes checking for sys/types.h... (cached) yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for strlcat... no checking for strerror... yes checking for working alloca.h... yes checking for alloca... yes checking whether isnan is declared... yes checking whether isinf is declared... yes checking whether isfinite is declared... no checking whether signbit is declared... no checking for long long int... yes checking for unsigned long long int... yes checking for struct stat.st_blksize... yes checking for IEEE floating point format... yes checking for size_t... yes checking for off_t... yes checking for ssize_t... yes checking for ptrdiff_t... yes checking for uchar... no checking whether char is unsigned... no checking whether byte ordering is bigendian... no checking size of short... 2 checking size of int... 4 checking size of long... 8 checking size of float... 4 checking size of double... 8 checking size of off_t... 8 checking size of size_t... 8 checking for manual-page index command... checking what to call the output of the ftpbin target... binary-netcdf-4.0-snapshot2008070100_gfortran_gfortran.tar gfortran c++ checking binary distribution directory... /home/ftp/pub/binary/linux_2.6-x86_64 checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking for H5Fflush in -lhdf5... yes checking for H5DSis_scale in -lhdf5_hl... yes checking for H5Pget_fapl_mpiposix in -lhdf5... no checking for H5Pget_fapl_mpio in -lhdf5... no checking whether parallel I/O features are to be included... no checking for H5Pset_deflate in -lhdf5... yes checking for gawk... (cached) gawk checking for flex... flex checking lex output file root... lex.yy checking lex library... -lfl checking whether yytext is a pointer... yes checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes configure: generating header files and makefiles configure: creating ./config.status config.status: creating Makefile config.status: creating man/Makefile config.status: creating man4/Makefile config.status: creating fortran/Makefile config.status: creating libsrc/Makefile config.status: creating libsrc4/Makefile config.status: creating nctest/Makefile config.status: creating nc_test4/Makefile config.status: creating nc_test/Makefile config.status: creating ncdump/Makefile config.status: creating ncgen/Makefile config.status: creating nf_test/Makefile config.status: creating cxx/Makefile config.status: creating cxx4/Makefile config.status: creating f90/Makefile config.status: creating examples/Makefile config.status: creating examples/C/Makefile config.status: creating examples/CDL/Makefile config.status: creating examples/CXX/Makefile config.status: creating examples/CXX4/Makefile config.status: creating examples/F90/Makefile config.status: creating examples/F77/Makefile config.status: creating win32/Makefile config.status: creating win32/NET/Makefile config.status: creating win32/NET/libsrc/Makefile config.status: creating win32/NET/ncdump/Makefile config.status: creating win32/NET/ncgen/Makefile config.status: creating win32/NET/examples/Makefile config.status: creating win32/NET/nctest/Makefile config.status: creating win32/NET/nc_test/Makefile config.status: creating config.h config.status: creating fortran/nfconfig1.inc config.status: executing depfiles commands config.status: executing libtool commands Making check in f90 make[1]: Entering directory `/shecky/n4_test/f90' gfortran -I../libsrc4 -I. -g -O2 -c -o typeSizes.o typeSizes.f90 make check-am make[2]: Entering directory `/shecky/n4_test/f90' /bin/sh ../libtool --mode=compile gfortran -I../libsrc4 -I. -g -O2 -c -o typeSizes.lo typeSizes.f90 libtool: compile: gfortran -I../libsrc4 -I. -g -O2 -c typeSizes.f90 -o typeSizes.o /bin/sh ../libtool --mode=compile gfortran -I../libsrc4 -I. -g -O2 -c -o netcdf4.lo netcdf4.f90 libtool: compile: gfortran -I../libsrc4 -I. -g -O2 -c netcdf4.f90 -o netcdf4.o /bin/sh ../libtool --mode=link gfortran -I../libsrc4 -I. -g -O2 -o libnetcdff90.la typeSizes.lo netcdf4.lo libtool: link: ar cru .libs/libnetcdff90.a typeSizes.o netcdf4.o libtool: link: ranlib .libs/libnetcdff90.a libtool: link: ( cd ".libs" && rm -f "libnetcdff90.la" && ln -s "../libnetcdff90.la" "libnetcdff90.la" ) make[2]: Leaving directory `/shecky/n4_test/f90' make[1]: Leaving directory `/shecky/n4_test/f90' Making check in fortran make[1]: Entering directory `/shecky/n4_test/fortran' echo '! NetCDF-3.' > netcdf.inc cat ../fortran/netcdf3.inc >> netcdf.inc echo >> netcdf.inc echo '! NetCDF-2.' >> netcdf.inc cat ../fortran/netcdf2.inc >> netcdf.inc echo >> netcdf.inc echo '! NetCDF-4.' >> netcdf.inc cat ../fortran/netcdf4.inc >> netcdf.inc make check-am make[2]: Entering directory `/shecky/n4_test/fortran' depbase=`echo fort-attio.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-attio.lo -MD -MP -MF $depbase.Tpo -c -o fort-attio.lo fort-attio.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-attio.lo -MD -MP -MF .deps/fort-attio.Tpo -c fort-attio.c -o fort-attio.o depbase=`echo fort-control.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-control.lo -MD -MP -MF $depbase.Tpo -c -o fort-control.lo fort-control.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-control.lo -MD -MP -MF .deps/fort-control.Tpo -c fort-control.c -o fort-control.o depbase=`echo fort-dim.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-dim.lo -MD -MP -MF $depbase.Tpo -c -o fort-dim.lo fort-dim.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-dim.lo -MD -MP -MF .deps/fort-dim.Tpo -c fort-dim.c -o fort-dim.o depbase=`echo fort-genatt.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-genatt.lo -MD -MP -MF $depbase.Tpo -c -o fort-genatt.lo fort-genatt.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-genatt.lo -MD -MP -MF .deps/fort-genatt.Tpo -c fort-genatt.c -o fort-genatt.o depbase=`echo fort-geninq.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-geninq.lo -MD -MP -MF $depbase.Tpo -c -o fort-geninq.lo fort-geninq.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-geninq.lo -MD -MP -MF .deps/fort-geninq.Tpo -c fort-geninq.c -o fort-geninq.o depbase=`echo fort-genvar.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-genvar.lo -MD -MP -MF $depbase.Tpo -c -o fort-genvar.lo fort-genvar.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-genvar.lo -MD -MP -MF .deps/fort-genvar.Tpo -c fort-genvar.c -o fort-genvar.o depbase=`echo fort-lib.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-lib.lo -MD -MP -MF $depbase.Tpo -c -o fort-lib.lo fort-lib.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-lib.lo -MD -MP -MF .deps/fort-lib.Tpo -c fort-lib.c -o fort-lib.o depbase=`echo fort-misc.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-misc.lo -MD -MP -MF $depbase.Tpo -c -o fort-misc.lo fort-misc.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-misc.lo -MD -MP -MF .deps/fort-misc.Tpo -c fort-misc.c -o fort-misc.o depbase=`echo fort-v2compat.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-v2compat.lo -MD -MP -MF $depbase.Tpo -c -o fort-v2compat.lo fort-v2compat.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-v2compat.lo -MD -MP -MF .deps/fort-v2compat.Tpo -c fort-v2compat.c -o fort-v2compat.o depbase=`echo fort-vario.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-vario.lo -MD -MP -MF $depbase.Tpo -c -o fort-vario.lo fort-vario.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-vario.lo -MD -MP -MF .deps/fort-vario.Tpo -c fort-vario.c -o fort-vario.o depbase=`echo fort-var1io.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-var1io.lo -MD -MP -MF $depbase.Tpo -c -o fort-var1io.lo fort-var1io.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-var1io.lo -MD -MP -MF .deps/fort-var1io.Tpo -c fort-var1io.c -o fort-var1io.o depbase=`echo fort-varaio.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-varaio.lo -MD -MP -MF $depbase.Tpo -c -o fort-varaio.lo fort-varaio.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-varaio.lo -MD -MP -MF .deps/fort-varaio.Tpo -c fort-varaio.c -o fort-varaio.o depbase=`echo fort-varmio.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-varmio.lo -MD -MP -MF $depbase.Tpo -c -o fort-varmio.lo fort-varmio.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-varmio.lo -MD -MP -MF .deps/fort-varmio.Tpo -c fort-varmio.c -o fort-varmio.o depbase=`echo fort-varsio.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-varsio.lo -MD -MP -MF $depbase.Tpo -c -o fort-varsio.lo fort-varsio.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-varsio.lo -MD -MP -MF .deps/fort-varsio.Tpo -c fort-varsio.c -o fort-varsio.o depbase=`echo fort-nc4.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-nc4.lo -MD -MP -MF $depbase.Tpo -c -o fort-nc4.lo fort-nc4.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/shecky/n4_test/install/include -I../libsrc4 -I/upc/share/ed/local/shecky/include -g -O2 -MT fort-nc4.lo -MD -MP -MF .deps/fort-nc4.Tpo -c fort-nc4.c -o fort-nc4.o /bin/sh ../libtool --tag=CC --mode=link cc -g -O2 -L/upc/share/ed/local/shecky/lib -version-info 5:0:0 -o libnetcdff.la -rpath /shecky/n4_test/install/lib fort-attio.lo fort-control.lo fort-dim.lo fort-genatt.lo fort-geninq.lo fort-genvar.lo fort-lib.lo fort-misc.lo fort-v2compat.lo fort-vario.lo fort-var1io.lo fort-varaio.lo fort-varmio.lo fort-varsio.lo fort-nc4.lo ../f90/libnetcdff90.la libtool: link: (cd .libs/libnetcdff.lax/libnetcdff90.a && ar x "/shecky/n4_test/fortran/../f90/.libs/libnetcdff90.a") libtool: link: ar cru .libs/libnetcdff.a fort-attio.o fort-control.o fort-dim.o fort-genatt.o fort-geninq.o fort-genvar.o fort-lib.o fort-misc.o fort-v2compat.o fort-vario.o fort-var1io.o fort-varaio.o fort-varmio.o fort-varsio.o fort-nc4.o .libs/libnetcdff.lax/libnetcdff90.a/typeSizes.o .libs/libnetcdff.lax/libnetcdff90.a/netcdf4.o libtool: link: ranlib .libs/libnetcdff.a libtool: link: rm -fr .libs/libnetcdff.lax libtool: link: ( cd ".libs" && rm -f "libnetcdff.la" && ln -s "../libnetcdff.la" "libnetcdff.la" ) make[2]: Leaving directory `/shecky/n4_test/fortran' make[1]: Leaving directory `/shecky/n4_test/fortran' Making check in nf_test make[1]: Entering directory `/shecky/n4_test/nf_test' make nf_test tst_f77_v2 ftst_vars ftst_vars2 ftst_vars3 ftst_vars4 ftst_vars5 ftst_types ftst_types2 ftst_groups f90tst_vars tst_types tst_f90 make[2]: Entering directory `/shecky/n4_test/nf_test' gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I/shecky/n4_test/install/include -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o test_get.o test_get.F gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I/shecky/n4_test/install/include -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o test_put.o test_put.F gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I/shecky/n4_test/install/include -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o nf_error.o nf_error.F gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I/shecky/n4_test/install/include -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o nf_test.o nf_test.F gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I/shecky/n4_test/install/include -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o test_read.o test_read.F gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I/shecky/n4_test/install/include -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o test_write.o test_write.F gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I/shecky/n4_test/install/include -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o util.o util.F depbase=`echo fortlib.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I/shecky/n4_test/install/include -g -O2 -MT fortlib.o -MD -MP -MF $depbase.Tpo -c -o fortlib.o fortlib.c &&\ mv -f $depbase.Tpo $depbase.Po /bin/sh ../libtool --tag=F77 --mode=link gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib -L/upc/share/ed/local/shecky/lib -L/shecky/n4_test/install/lib -o nf_test test_get.o test_put.o nf_error.o nf_test.o test_read.o test_write.o util.o fortlib.o ../fortran/libnetcdff.la -lm -lnetcdf -lhdf5_hl -lhdf5 libtool: link: gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -o nf_test test_get.o test_put.o nf_error.o nf_test.o test_read.o test_write.o util.o fortlib.o -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib ../fortran/.libs/libnetcdff.a /shecky/n4_test/install/lib/libnetcdf.a /upc/share/ed/local/shecky/lib/libhdf5_hl.a /upc/share/ed/local/shecky/lib/libhdf5.a -lz -lm gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I/shecky/n4_test/install/include -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o tst_f77_v2.o tst_f77_v2.F /bin/sh ../libtool --tag=F77 --mode=link gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib -L/upc/share/ed/local/shecky/lib -L/shecky/n4_test/install/lib -o tst_f77_v2 tst_f77_v2.o ../fortran/libnetcdff.la -lm -lnetcdf -lhdf5_hl -lhdf5 libtool: link: gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -o tst_f77_v2 tst_f77_v2.o -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib ../fortran/.libs/libnetcdff.a /shecky/n4_test/install/lib/libnetcdf.a /upc/share/ed/local/shecky/lib/libhdf5_hl.a /upc/share/ed/local/shecky/lib/libhdf5.a -lz -lm gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I/shecky/n4_test/install/include -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o ftst_vars.o ftst_vars.F gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o handle_err.o handle_err.f /bin/sh ../libtool --tag=F77 --mode=link gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib -L/upc/share/ed/local/shecky/lib -L/shecky/n4_test/install/lib -o ftst_vars ftst_vars.o fortlib.o handle_err.o ../fortran/libnetcdff.la -lm -lnetcdf -lhdf5_hl -lhdf5 libtool: link: gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -o ftst_vars ftst_vars.o fortlib.o handle_err.o -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib ../fortran/.libs/libnetcdff.a /shecky/n4_test/install/lib/libnetcdf.a /upc/share/ed/local/shecky/lib/libhdf5_hl.a /upc/share/ed/local/shecky/lib/libhdf5.a -lz -lm gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I/shecky/n4_test/install/include -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o ftst_vars2.o ftst_vars2.F /bin/sh ../libtool --tag=F77 --mode=link gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib -L/upc/share/ed/local/shecky/lib -L/shecky/n4_test/install/lib -o ftst_vars2 ftst_vars2.o fortlib.o handle_err.o ../fortran/libnetcdff.la -lm -lnetcdf -lhdf5_hl -lhdf5 libtool: link: gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -o ftst_vars2 ftst_vars2.o fortlib.o handle_err.o -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib ../fortran/.libs/libnetcdff.a /shecky/n4_test/install/lib/libnetcdf.a /upc/share/ed/local/shecky/lib/libhdf5_hl.a /upc/share/ed/local/shecky/lib/libhdf5.a -lz -lm gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I/shecky/n4_test/install/include -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o ftst_vars3.o ftst_vars3.F /bin/sh ../libtool --tag=F77 --mode=link gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib -L/upc/share/ed/local/shecky/lib -L/shecky/n4_test/install/lib -o ftst_vars3 ftst_vars3.o fortlib.o handle_err.o ../fortran/libnetcdff.la -lm -lnetcdf -lhdf5_hl -lhdf5 libtool: link: gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -o ftst_vars3 ftst_vars3.o fortlib.o handle_err.o -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib ../fortran/.libs/libnetcdff.a /shecky/n4_test/install/lib/libnetcdf.a /upc/share/ed/local/shecky/lib/libhdf5_hl.a /upc/share/ed/local/shecky/lib/libhdf5.a -lz -lm gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I/shecky/n4_test/install/include -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o ftst_vars4.o ftst_vars4.F /bin/sh ../libtool --tag=F77 --mode=link gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib -L/upc/share/ed/local/shecky/lib -L/shecky/n4_test/install/lib -o ftst_vars4 ftst_vars4.o fortlib.o handle_err.o ../fortran/libnetcdff.la -lm -lnetcdf -lhdf5_hl -lhdf5 libtool: link: gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -o ftst_vars4 ftst_vars4.o fortlib.o handle_err.o -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib ../fortran/.libs/libnetcdff.a /shecky/n4_test/install/lib/libnetcdf.a /upc/share/ed/local/shecky/lib/libhdf5_hl.a /upc/share/ed/local/shecky/lib/libhdf5.a -lz -lm gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I/shecky/n4_test/install/include -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o ftst_vars5.o ftst_vars5.F /bin/sh ../libtool --tag=F77 --mode=link gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib -L/upc/share/ed/local/shecky/lib -L/shecky/n4_test/install/lib -o ftst_vars5 ftst_vars5.o fortlib.o handle_err.o ../fortran/libnetcdff.la -lm -lnetcdf -lhdf5_hl -lhdf5 libtool: link: gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -o ftst_vars5 ftst_vars5.o fortlib.o handle_err.o -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib ../fortran/.libs/libnetcdff.a /shecky/n4_test/install/lib/libnetcdf.a /upc/share/ed/local/shecky/lib/libhdf5_hl.a /upc/share/ed/local/shecky/lib/libhdf5.a -lz -lm gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I/shecky/n4_test/install/include -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o ftst_types.o ftst_types.F /bin/sh ../libtool --tag=F77 --mode=link gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib -L/upc/share/ed/local/shecky/lib -L/shecky/n4_test/install/lib -o ftst_types ftst_types.o fortlib.o handle_err.o ../fortran/libnetcdff.la -lm -lnetcdf -lhdf5_hl -lhdf5 libtool: link: gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -o ftst_types ftst_types.o fortlib.o handle_err.o -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib ../fortran/.libs/libnetcdff.a /shecky/n4_test/install/lib/libnetcdf.a /upc/share/ed/local/shecky/lib/libhdf5_hl.a /upc/share/ed/local/shecky/lib/libhdf5.a -lz -lm gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I/shecky/n4_test/install/include -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o ftst_types2.o ftst_types2.F /bin/sh ../libtool --tag=F77 --mode=link gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib -L/upc/share/ed/local/shecky/lib -L/shecky/n4_test/install/lib -o ftst_types2 ftst_types2.o fortlib.o handle_err.o ../fortran/libnetcdff.la -lm -lnetcdf -lhdf5_hl -lhdf5 libtool: link: gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -o ftst_types2 ftst_types2.o fortlib.o handle_err.o -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib ../fortran/.libs/libnetcdff.a /shecky/n4_test/install/lib/libnetcdf.a /upc/share/ed/local/shecky/lib/libhdf5_hl.a /upc/share/ed/local/shecky/lib/libhdf5.a -lz -lm gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I/shecky/n4_test/install/include -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o ftst_groups.o ftst_groups.F /bin/sh ../libtool --tag=F77 --mode=link gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib -L/upc/share/ed/local/shecky/lib -L/shecky/n4_test/install/lib -o ftst_groups ftst_groups.o fortlib.o handle_err.o ../fortran/libnetcdff.la -lm -lnetcdf -lhdf5_hl -lhdf5 libtool: link: gfortran -I../fortran -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -o ftst_groups ftst_groups.o fortlib.o handle_err.o -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib ../fortran/.libs/libnetcdff.a /shecky/n4_test/install/lib/libnetcdf.a /upc/share/ed/local/shecky/lib/libhdf5_hl.a /upc/share/ed/local/shecky/lib/libhdf5.a -lz -lm gfortran -I../fortran -I../f90 -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o f90tst_vars.o f90tst_vars.f90 /bin/sh ../libtool --mode=link gfortran -I../fortran -I../f90 -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib -L/upc/share/ed/local/shecky/lib -L/shecky/n4_test/install/lib -o f90tst_vars f90tst_vars.o ../fortran/libnetcdff.la -lm -lnetcdf -lhdf5_hl -lhdf5 libtool: link: gfortran -I../fortran -I../f90 -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -o f90tst_vars f90tst_vars.o -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib ../fortran/.libs/libnetcdff.a /shecky/n4_test/install/lib/libnetcdf.a /upc/share/ed/local/shecky/lib/libhdf5_hl.a /upc/share/ed/local/shecky/lib/libhdf5.a -lz -lm gfortran -I../fortran -I../f90 -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o tst_types.o tst_types.f90 /bin/sh ../libtool --mode=link gfortran -I../fortran -I../f90 -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib -L/upc/share/ed/local/shecky/lib -L/shecky/n4_test/install/lib -o tst_types tst_types.o ../fortran/libnetcdff.la -lm -lnetcdf -lhdf5_hl -lhdf5 libtool: link: gfortran -I../fortran -I../f90 -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -o tst_types tst_types.o -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib ../fortran/.libs/libnetcdff.a /shecky/n4_test/install/lib/libnetcdf.a /upc/share/ed/local/shecky/lib/libhdf5_hl.a /upc/share/ed/local/shecky/lib/libhdf5.a -lz -lm gfortran -I../fortran -I../f90 -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -c -o tst_f90.o tst_f90.f90 /bin/sh ../libtool --mode=link gfortran -I../fortran -I../f90 -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib -L/upc/share/ed/local/shecky/lib -L/shecky/n4_test/install/lib -o tst_f90 tst_f90.o ../fortran/libnetcdff.la -lm -lnetcdf -lhdf5_hl -lhdf5 libtool: link: gfortran -I../fortran -I../f90 -I/upc/share/ed/local/shecky/include -I/upc/share/ed/local/shecky/include -I/shecky/n4_test/install/include -I../f90 -g -O2 -o tst_f90 tst_f90.o -L/shecky/n4_test/install/lib -L/upc/share/ed/local/shecky/lib ../fortran/.libs/libnetcdff.a /shecky/n4_test/install/lib/libnetcdf.a /upc/share/ed/local/shecky/lib/libhdf5_hl.a /upc/share/ed/local/shecky/lib/libhdf5.a -lz -lm make[2]: Leaving directory `/shecky/n4_test/nf_test' make check-TESTS make[2]: Entering directory `/shecky/n4_test/nf_test' *** Testing netCDF-3 Fortran 77 API. NetCDF version: 4.0-snapshot2008070100 of Jul 1 2008 02:10:28 $ *** testing nf_strerror ... *** testing nf_open ... *** testing nf_close ... *** testing nf_inq ... *** testing nf_inq_dimid ... *** testing nf_inq_dim ... *** testing nf_inq_dimlen ... *** testing nf_inq_dimname ... *** testing nf_inq_varid ... *** testing nf_inq_var ... *** testing nf_inq_natts ... *** testing nf_inq_ndims ... *** testing nf_inq_nvars ... *** testing nf_inq_unlimdim ... *** testing nf_inq_format ... *** testing nf_inq_vardimid ... *** testing nf_inq_varname ... *** testing nf_inq_varnatts ... *** testing nf_inq_varndims ... *** testing nf_inq_vartype ... *** testing nf_get_var1_text ... *** testing nf_get_var1_int1 ... *** testing nf_get_var1_int2 ... *** testing nf_get_var1_int ... *** testing nf_get_var1_real ... *** testing nf_get_var1_double ... *** testing nf_get_var_text ... *** testing nf_get_var_int1 ... *** testing nf_get_var_int2 ... *** testing nf_get_var_int ... *** testing nf_get_var_real ... *** testing nf_get_var_double ... *** testing nf_get_vara_text ... *** testing nf_get_vara_int1 ... *** testing nf_get_vara_int2 ... *** testing nf_get_vara_int ... *** testing nf_get_vara_real ... *** testing nf_get_vara_double ... *** testing nf_get_vars_text ... *** testing nf_get_vars_int1 ... *** testing nf_get_vars_int2 ... *** testing nf_get_vars_int ... *** testing nf_get_vars_real ... *** testing nf_get_vars_double ... *** testing nf_get_varm_text ... *** testing nf_get_varm_int1 ... *** testing nf_get_varm_int2 ... *** testing nf_get_varm_int ... *** testing nf_get_varm_real ... *** testing nf_get_varm_double ... *** testing nf_get_att_text ... *** testing nf_get_att_int1 ... *** testing nf_get_att_int2 ... *** testing nf_get_att_int ... *** testing nf_get_att_real ... *** testing nf_get_att_double ... *** testing nf_inq_att ... *** testing nf_inq_attname ... *** testing nf_inq_attid ... *** testing nf_inq_attlen ... *** testing nf_inq_atttype ... *** testing nf_create ... *** testing nf_redef ... *** testing nf_enddef ... *** testing nf_sync ... *** testing nf_abort ... *** testing nf_def_dim ... *** testing nf_rename_dim ... *** testing nf_def_var ... *** testing nf_put_var1_text ... *** testing nf_put_var1_int1 ... *** testing nf_put_var1_int2 ... *** testing nf_put_var1_int ... *** testing nf_put_var1_real ... *** testing nf_put_var1_double ... *** testing nf_put_var_text ... *** testing nf_put_var_int1 ... *** testing nf_put_var_int2 ... *** testing nf_put_var_int ... *** testing nf_put_var_real ... *** testing nf_put_var_double ... *** testing nf_put_vara_text ... *** testing nf_put_vara_int1 ... *** testing nf_put_vara_int2 ... *** testing nf_put_vara_int ... *** testing nf_put_vara_real ... *** testing nf_put_vara_double ... *** testing nf_put_vars_text ... *** testing nf_put_vars_int1 ... *** testing nf_put_vars_int2 ... *** testing nf_put_vars_int ... *** testing nf_put_vars_real ... *** testing nf_put_vars_double ... *** testing nf_put_varm_text ... *** testing nf_put_varm_int1 ... *** testing nf_put_varm_int2 ... *** testing nf_put_varm_int ... *** testing nf_put_varm_real ... *** testing nf_put_varm_double ... *** testing nf_rename_var ... *** testing nf_put_att_text ... *** testing nf_put_att_int1 ... *** testing nf_put_att_int2 ... *** testing nf_put_att_int ... *** testing nf_put_att_real ... *** testing nf_put_att_double ... *** testing nf_copy_att ... *** testing nf_rename_att ... *** testing nf_del_att ... *** testing nf_set_fill ... *** testing nf_set_default_format ... Total number of failures: 0 *** SUCCESS! PASS: nf_test PASS: tst_f77_v2 *** Testing definition of netCDF-4 vars from Fortran 77. *** SUCCESS! PASS: ftst_vars *** Testing netCDF-4 vars from F77 with new types. *** SUCCESS! PASS: ftst_vars2 *** Testing enum and opaque types. *** SUCCESS! PASS: ftst_vars3 *** Testing VLEN types. *** SUCCESS! PASS: ftst_vars4 *** Testing compound types. *** SUCCESS! PASS: ftst_vars5 *** Testing netCDF-4 compound type from F77. *** SUCCESS! PASS: ftst_types *** Testing netCDF-4 compound types from F77 some more. *** SUCCESS! PASS: ftst_types2 *** Testing netCDF-4 groups from F77. *** SUCCESS! PASS: ftst_groups *** Testing definition of netCDF-4 vars from Fortran 90. *** SUCCESS! PASS: f90tst_vars *** Testing new netCDF-4 types from Fortran 90. *** SUCCESS! PASS: tst_types *** Testing netCDF-3 Fortran 90 API. *** SUCCESS! PASS: tst_f90 =================== All 13 tests passed =================== make[2]: Leaving directory `/shecky/n4_test/nf_test' make[1]: Leaving directory `/shecky/n4_test/nf_test' Making check in win32 make[1]: Entering directory `/shecky/n4_test/win32' Making check in NET make[2]: Entering directory `/shecky/n4_test/win32/NET' Making check in examples make[3]: Entering directory `/shecky/n4_test/win32/NET/examples' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/shecky/n4_test/win32/NET/examples' Making check in libsrc make[3]: Entering directory `/shecky/n4_test/win32/NET/libsrc' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/shecky/n4_test/win32/NET/libsrc' Making check in ncdump make[3]: Entering directory `/shecky/n4_test/win32/NET/ncdump' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/shecky/n4_test/win32/NET/ncdump' Making check in ncgen make[3]: Entering directory `/shecky/n4_test/win32/NET/ncgen' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/shecky/n4_test/win32/NET/ncgen' Making check in nctest make[3]: Entering directory `/shecky/n4_test/win32/NET/nctest' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/shecky/n4_test/win32/NET/nctest' Making check in nc_test make[3]: Entering directory `/shecky/n4_test/win32/NET/nc_test' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/shecky/n4_test/win32/NET/nc_test' make[3]: Entering directory `/shecky/n4_test/win32/NET' make[3]: Nothing to be done for `check-am'. make[3]: Leaving directory `/shecky/n4_test/win32/NET' make[2]: Leaving directory `/shecky/n4_test/win32/NET' make[2]: Entering directory `/shecky/n4_test/win32' make[2]: Nothing to be done for `check-am'. make[2]: Leaving directory `/shecky/n4_test/win32' make[1]: Leaving directory `/shecky/n4_test/win32' make[1]: Entering directory `/shecky/n4_test' make[1]: Nothing to be done for `check-am'. make[1]: Leaving directory `/shecky/n4_test' Making install in f90 make[1]: Entering directory `/shecky/n4_test/f90' make install-am make[2]: Entering directory `/shecky/n4_test/f90' make[3]: Entering directory `/shecky/n4_test/f90' make[3]: Nothing to be done for `install-exec-am'. test -z "/shecky/n4_test/install/share/man/man3" || /bin/mkdir -p "/shecky/n4_test/install/share/man/man3" /usr/bin/install -c -m 644 './netcdf_f90.3' '/shecky/n4_test/install/share/man/man3/netcdf_f90.3' test -z "/shecky/n4_test/install/include" || /bin/mkdir -p "/shecky/n4_test/install/include" /usr/bin/install -c -m 644 'typesizes.mod' '/shecky/n4_test/install/include/typesizes.mod' /usr/bin/install -c -m 644 'netcdf.mod' '/shecky/n4_test/install/include/netcdf.mod' make[3]: Leaving directory `/shecky/n4_test/f90' make[2]: Leaving directory `/shecky/n4_test/f90' make[1]: Leaving directory `/shecky/n4_test/f90' Making install in fortran make[1]: Entering directory `/shecky/n4_test/fortran' make install-am make[2]: Entering directory `/shecky/n4_test/fortran' make[3]: Entering directory `/shecky/n4_test/fortran' test -z "/shecky/n4_test/install/lib" || /bin/mkdir -p "/shecky/n4_test/install/lib" /bin/sh ../libtool --mode=install /usr/bin/install -c 'libnetcdff.la' '/shecky/n4_test/install/lib/libnetcdff.la' libtool: install: /usr/bin/install -c .libs/libnetcdff.lai /shecky/n4_test/install/lib/libnetcdff.la libtool: install: /usr/bin/install -c .libs/libnetcdff.a /shecky/n4_test/install/lib/libnetcdff.a libtool: install: chmod 644 /shecky/n4_test/install/lib/libnetcdff.a libtool: install: ranlib /shecky/n4_test/install/lib/libnetcdff.a libtool: finish: PATH="/shecky/local/bin:/usr/local/bin:/usr/bin:/bin:/opt/gnu/bin:/usr/sbin:/sbin:/opt/bin:/sbin:/usr/kerberos/bin:/usr/X11R6/bin:/opt/absoft10.0/bin:/sbin" ldconfig -n /shecky/n4_test/install/lib ---------------------------------------------------------------------- Libraries have been installed in: /shecky/n4_test/install/lib If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the `-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the `LD_LIBRARY_PATH' environment variable during execution - add LIBDIR to the `LD_RUN_PATH' environment variable during linking - use the `-Wl,-rpath -Wl,LIBDIR' linker flag - have your system administrator add LIBDIR to `/etc/ld.so.conf' See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- test -z "/shecky/n4_test/install/include" || /bin/mkdir -p "/shecky/n4_test/install/include" /usr/bin/install -c -m 644 'netcdf.inc' '/shecky/n4_test/install/include/netcdf.inc' test -z "/shecky/n4_test/install/share/man/man3" || /bin/mkdir -p "/shecky/n4_test/install/share/man/man3" /usr/bin/install -c -m 644 './netcdf_f77.3' '/shecky/n4_test/install/share/man/man3/netcdf_f77.3' make[3]: Leaving directory `/shecky/n4_test/fortran' make[2]: Leaving directory `/shecky/n4_test/fortran' make[1]: Leaving directory `/shecky/n4_test/fortran' Making install in nf_test make[1]: Entering directory `/shecky/n4_test/nf_test' make[2]: Entering directory `/shecky/n4_test/nf_test' make[2]: Nothing to be done for `install-exec-am'. make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/shecky/n4_test/nf_test' make[1]: Leaving directory `/shecky/n4_test/nf_test' Making install in win32 make[1]: Entering directory `/shecky/n4_test/win32' Making install in NET make[2]: Entering directory `/shecky/n4_test/win32/NET' Making install in examples make[3]: Entering directory `/shecky/n4_test/win32/NET/examples' make[4]: Entering directory `/shecky/n4_test/win32/NET/examples' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shecky/n4_test/win32/NET/examples' make[3]: Leaving directory `/shecky/n4_test/win32/NET/examples' Making install in libsrc make[3]: Entering directory `/shecky/n4_test/win32/NET/libsrc' make[4]: Entering directory `/shecky/n4_test/win32/NET/libsrc' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shecky/n4_test/win32/NET/libsrc' make[3]: Leaving directory `/shecky/n4_test/win32/NET/libsrc' Making install in ncdump make[3]: Entering directory `/shecky/n4_test/win32/NET/ncdump' make[4]: Entering directory `/shecky/n4_test/win32/NET/ncdump' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shecky/n4_test/win32/NET/ncdump' make[3]: Leaving directory `/shecky/n4_test/win32/NET/ncdump' Making install in ncgen make[3]: Entering directory `/shecky/n4_test/win32/NET/ncgen' make[4]: Entering directory `/shecky/n4_test/win32/NET/ncgen' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shecky/n4_test/win32/NET/ncgen' make[3]: Leaving directory `/shecky/n4_test/win32/NET/ncgen' Making install in nctest make[3]: Entering directory `/shecky/n4_test/win32/NET/nctest' make[4]: Entering directory `/shecky/n4_test/win32/NET/nctest' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shecky/n4_test/win32/NET/nctest' make[3]: Leaving directory `/shecky/n4_test/win32/NET/nctest' Making install in nc_test make[3]: Entering directory `/shecky/n4_test/win32/NET/nc_test' make[4]: Entering directory `/shecky/n4_test/win32/NET/nc_test' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shecky/n4_test/win32/NET/nc_test' make[3]: Leaving directory `/shecky/n4_test/win32/NET/nc_test' make[3]: Entering directory `/shecky/n4_test/win32/NET' make[4]: Entering directory `/shecky/n4_test/win32/NET' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/shecky/n4_test/win32/NET' make[3]: Leaving directory `/shecky/n4_test/win32/NET' make[2]: Leaving directory `/shecky/n4_test/win32/NET' make[2]: Entering directory `/shecky/n4_test/win32' make[3]: Entering directory `/shecky/n4_test/win32' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/shecky/n4_test/win32' make[2]: Leaving directory `/shecky/n4_test/win32' make[1]: Leaving directory `/shecky/n4_test/win32' make[1]: Entering directory `/shecky/n4_test' make[2]: Entering directory `/shecky/n4_test' make[2]: Nothing to be done for `install-exec-am'. make install-data-hook make[3]: Entering directory `/shecky/n4_test' +-------------------------------------------------------------+ | Congratulations! You have successfully installed netCDF! | | | | CAUTION: | | | | If you have not already run "make check", then we strongly | | recommend you do so. It does not take very long. | | | | Before using netCDF to store important data, test your | | build with "make check". | | | | NetCDF is tested nightly on many platforms at Unidata | | but your platform is probably different in some ways. | | | | If any tests fail, please see the netCDF web site: | | http://www.unidata.ucar.edu/software/netcdf/ | | | | NetCDF is developed and maintained at the Unidata Program | | Center. Unidata provides a broad array of data and software | | tools for use in geoscience education and research. | | http://www.unidata.ucar.edu | +-------------------------------------------------------------+ make[3]: Leaving directory `/shecky/n4_test' make[2]: Leaving directory `/shecky/n4_test' make[1]: Leaving directory `/shecky/n4_test' [ -f /shecky/n4_test/install/include/netcdf.inc ] || (echo "Missing!" && exit 1) [ -f /shecky/n4_test/install/share/man/man3/netcdf_f77.3 ] || (echo "Missing!" && exit 1) [ -f /shecky/n4_test/install/lib/libnetcdff.a ] || (echo "Missing!" && exit 1) [ -f /shecky/n4_test/install/include/netcdf.mod ] || (echo "Missing!" && exit 1) [ -f /shecky/n4_test/install/include/typesizes.mod ] || (echo "Missing!" && exit 1) [ -f /shecky/n4_test/install/share/man/man3/netcdf_f90.3 ] || (echo "Missing!" && exit 1) echo " *** SUCCESS: all files were found!" *** SUCCESS: all files were found! This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by netCDF configure 4.0-snapshot2008070100, which was generated by GNU Autoconf 2.62. Invocation command line was $ ./configure --enable-netcdf-4 --with-hdf5=/upc/share/ed/local/shecky --with-zlib=/upc/share/ed/local/shecky --enable-separate-fortran --with-netcdf-c-lib=/shecky/n4_test/install --disable-c --disable-cxx --prefix=/shecky/n4_test/install --disable-compiler-recover ## --------- ## ## Platform. ## ## --------- ## hostname = shecky.unidata.ucar.edu uname -m = x86_64 uname -r = 2.6.23.17-88.fc7 uname -s = Linux uname -v = #1 SMP Thu May 15 00:02:29 EDT 2008 /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /shecky/local/bin PATH: /usr/local/bin PATH: /usr/bin PATH: /bin PATH: /opt/gnu/bin PATH: /usr/sbin PATH: /sbin PATH: /opt/bin PATH: /sbin PATH: /usr/kerberos/bin PATH: /usr/X11R6/bin PATH: /opt/absoft10.0/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:2237: netCDF 4.0-snapshot2008070100 configure:2278: checking build system type configure:2296: result: x86_64-unknown-linux-gnu configure:2318: checking host system type configure:2333: result: x86_64-unknown-linux-gnu configure:2380: checking for a BSD-compatible install configure:2448: result: /usr/bin/install -c configure:2459: checking whether build environment is sane configure:2502: result: yes configure:2527: checking for a thread-safe mkdir -p configure:2566: result: /bin/mkdir -p configure:2579: checking for gawk configure:2595: found /usr/bin/gawk configure:2606: result: gawk configure:2617: checking whether make sets $(MAKE) configure:2639: result: yes configure:2831: checking user options configure:2874: checking whether CXX is set to '' configure:2878: result: no configure:2882: checking whether FC is set to '' configure:2886: result: no configure:2890: checking whether F90 is set to '' configure:2894: result: no configure:2898: checking whether this is a netCDF-4.x build configure:2906: result: yes configure:2912: Processing NetCDF-4 options. configure:2917: checking whether netCDF-4 is to be built configure:2925: result: yes configure:2941: checking whether DAP client is to be built configure:2949: result: no configure:2969: checking whether new netCDF-4 C++ API is to be built configure:2977: result: no configure:2981: checking whether HDF5 should do data conversions configure:2989: result: no configure:3000: checking whether extra example tests should be run configure:3008: result: no configure:3012: checking whether parallel IO tests should be run configure:3020: result: no configure:3024: checking whether a location for the HDF5 library was specified configure:3033: result: /upc/share/ed/local/shecky configure:3039: checking whether a location for the ZLIB library was specified configure:3047: result: /upc/share/ed/local/shecky configure:3053: checking whether a location for the SZLIB library was specified configure:3061: result: configure:3067: checking whether netCDF-4 logging is enabled configure:3075: result: no configure:3169: checking whether netCDF extra tests should be run (developers only) configure:3177: result: no configure:3196: checking whether documentation is to be installed configure:3204: result: no configure:3216: checking whether Fortran compiler(s) should be tested during configure configure:3224: result: yes configure:3229: checking whether configure should try to set compiler flags configure:3237: result: yes configure:3241: checking whether FFIO will be used configure:3249: result: no configure:3262: checking whether to skip C++, F77, or F90 APIs if compiler is broken configure:3270: result: no configure:3274: checking whether only the C library is desired configure:3282: result: no configure:3301: checking whether examples should be built configure:3309: result: yes configure:3313: checking whether F77 API is desired configure:3322: result: yes configure:3327: checking whether F90 API is desired configure:3337: result: yes configure:3341: checking whether fortran type sizes should be checked configure:3349: result: yes configure:3355: checking whether C API is desired configure:3363: result: no configure:3370: checking where to get netCDF C-only library for separate fortran libraries configure:3386: result: /shecky/n4_test/install configure:3401: checking whether CXX API is desired configure:3410: result: no configure:3421: checking whether v2 netCDF API should be built configure:3429: result: yes configure:3448: checking whether the ncgen/ncdump should be built configure:3457: result: no configure:3469: checking whether large file (> 2GB) tests should be run configure:3477: result: no configure:3496: checking whether benchmaks should be run (experimental) configure:3504: result: no configure:3516: checking whether extreme numbers should be used in tests configure:3531: result: yes configure:3545: checking where to put large temp files if large file tests are run configure:3554: result: . configure:3565: checking whether a win32 DLL is desired configure:3573: result: no configure:3597: checking whether separate fortran libs are desired configure:3606: result: yes configure:3676: finding C compiler configure:3733: checking for xlc configure:3763: result: no configure:3733: checking for cc configure:3749: found /usr/bin/cc configure:3760: result: cc configure:3796: checking for C compiler version configure:3804: cc --version >&5 cc (GCC) 4.1.2 20070925 (Red Hat 4.1.2-27) Copyright (C) 2006 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:3808: $? = 0 configure:3815: cc -v >&5 Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --enable-plugin --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-cpu=generic --host=x86_64-redhat-linux Thread model: posix gcc version 4.1.2 20070925 (Red Hat 4.1.2-27) configure:3819: $? = 0 configure:3826: cc -V >&5 cc: '-V' option must have argument configure:3830: $? = 1 configure:3853: checking for C compiler default output file name configure:3875: cc conftest.c >&5 configure:3879: $? = 0 configure:3917: result: a.out configure:3934: checking whether the C compiler works configure:3944: ./a.out configure:3948: $? = 0 configure:3965: result: yes configure:3972: checking whether we are cross compiling configure:3974: result: no configure:3977: checking for suffix of executables configure:3984: cc -o conftest conftest.c >&5 configure:3988: $? = 0 configure:4012: result: configure:4018: checking for suffix of object files configure:4044: cc -c conftest.c >&5 configure:4048: $? = 0 configure:4071: result: o configure:4075: checking whether we are using the GNU C compiler configure:4104: cc -c conftest.c >&5 configure:4111: $? = 0 configure:4128: result: yes configure:4137: checking whether cc accepts -g configure:4167: cc -c -g conftest.c >&5 configure:4174: $? = 0 configure:4275: result: yes configure:4292: checking for cc option to accept ISO C89 configure:4366: cc -c -g -O2 conftest.c >&5 configure:4373: $? = 0 configure:4396: result: none needed configure:4425: checking for style of include used by make configure:4453: result: GNU configure:4478: checking dependency style of cc configure:4569: result: gcc3 configure:4588: checking whether cc understands -c and -o together configure:4620: cc -c conftest.c -o conftest2.o >&5 configure:4624: $? = 0 configure:4630: cc -c conftest.c -o conftest2.o >&5 configure:4634: $? = 0 configure:4689: result: yes configure:4716: checking for an ANSI C-conforming const configure:4791: cc -c -g -O2 conftest.c >&5 configure:4798: $? = 0 configure:4813: result: yes configure:4844: finding Fortran compiler (will not be used if Fortran API is not desired) configure:5240: checking for Fortran compiler version configure:5248: gfortran --version >&5 GNU Fortran (GCC) 4.1.2 20070925 (Red Hat 4.1.2-27) Copyright (C) 2007 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:5252: $? = 0 configure:5259: gfortran -v >&5 Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --enable-plugin --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-cpu=generic --host=x86_64-redhat-linux Thread model: posix gcc version 4.1.2 20070925 (Red Hat 4.1.2-27) configure:5263: $? = 0 configure:5270: gfortran -V >&5 gfortran: '-V' option must have argument configure:5274: $? = 1 configure:5282: checking whether we are using the GNU Fortran compiler configure:5301: gfortran -c conftest.F >&5 configure:5308: $? = 0 configure:5325: result: yes configure:5331: checking whether gfortran accepts -g configure:5348: gfortran -c -g conftest.f >&5 configure:5355: $? = 0 configure:5371: result: yes configure:5521: checking for Fortran 77 compiler version configure:5529: gfortran --version >&5 GNU Fortran (GCC) 4.1.2 20070925 (Red Hat 4.1.2-27) Copyright (C) 2007 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:5533: $? = 0 configure:5540: gfortran -v >&5 Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --enable-plugin --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-cpu=generic --host=x86_64-redhat-linux Thread model: posix gcc version 4.1.2 20070925 (Red Hat 4.1.2-27) configure:5544: $? = 0 configure:5551: gfortran -V >&5 gfortran: '-V' option must have argument configure:5555: $? = 1 configure:5563: checking whether we are using the GNU Fortran 77 compiler configure:5582: gfortran -c conftest.F >&5 configure:5589: $? = 0 configure:5606: result: yes configure:5612: checking whether gfortran accepts -g configure:5629: gfortran -c -g conftest.f >&5 configure:5636: $? = 0 configure:5652: result: yes configure:5700: setting up Fortran 90 configure:5719: checking for Fortran flag to compile .f90 files configure:5741: gfortran -c -g -O2 conftest.f90 >&5 configure:5748: $? = 0 configure:5767: result: none configure:5797: checking fortran 90 modules inclusion flag configure:5828: gfortran -c -g -O2 conftest.f90 >&5 configure:5835: $? = 0 configure:5868: gfortran -c -g -O2 -Itmpdir_0 conftest.f90 >&5 configure:5875: $? = 0 configure:5906: result: -I configure:5918: checking if Fortran compiler can handle Fortran-90 configure:5926: gfortran -g -O2 conftest.f90 configure:5929: $? = 0 configure:5943: result: yes configure:5952: finding C++ compiler (will not be used if C++ API is not desired) configure:6019: checking for cl configure:6049: result: no configure:6019: checking for KCC configure:6049: result: no configure:6019: checking for CC configure:6049: result: no configure:6019: checking for cxx configure:6049: result: no configure:6019: checking for cc++ configure:6049: result: no configure:6019: checking for xlC configure:6049: result: no configure:6019: checking for aCC configure:6049: result: no configure:6019: checking for c++ configure:6035: found /usr/local/bin/c++ configure:6046: result: c++ configure:6077: checking for C++ compiler version configure:6085: c++ --version >&5 c++ (GCC) 4.1.0 Copyright (C) 2006 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:6089: $? = 0 configure:6096: c++ -v >&5 Using built-in specs. Target: x86_64-unknown-linux-gnu Configured with: ../gcc-4.1.0/configure --enable-languages=c,c++,fortran Thread model: posix gcc version 4.1.0 configure:6100: $? = 0 configure:6107: c++ -V >&5 c++: '-V' option must have argument configure:6111: $? = 1 configure:6114: checking whether we are using the GNU C++ compiler configure:6143: c++ -c conftest.cpp >&5 configure:6150: $? = 0 configure:6167: result: yes configure:6176: checking whether c++ accepts -g configure:6206: c++ -c -g conftest.cpp >&5 configure:6213: $? = 0 configure:6314: result: yes configure:6339: checking dependency style of c++ configure:6430: result: gcc3 configure:6503: setting up libtool configure:6531: checking for a sed that does not truncate output configure:6597: result: /bin/sed configure:6615: checking for grep that handles long lines and -e configure:6675: result: /bin/grep configure:6680: checking for egrep configure:6744: result: /bin/grep -E configure:6749: checking for fgrep configure:6813: result: /bin/grep -F configure:6848: checking for ld used by cc configure:6915: result: /usr/bin/ld configure:6924: checking if the linker (/usr/bin/ld) is GNU ld configure:6939: result: yes configure:6951: checking for BSD- or MS-compatible name lister (nm) configure:7000: result: /usr/bin/nm -B configure:7122: checking the name lister (/usr/bin/nm -B) interface configure:7129: cc -c -g -O2 conftest.c >&5 configure:7132: /usr/bin/nm -B "conftest.o" configure:7135: output 0000000000000000 B some_variable configure:7142: result: BSD nm configure:7145: checking whether ln -s works configure:7149: result: yes configure:7157: checking the maximum length of command line arguments configure:7277: result: 98304 configure:7294: checking whether the shell understands some XSI constructs configure:7302: result: yes configure:7306: checking whether the shell understands "+=" configure:7312: result: yes configure:7347: checking for /usr/bin/ld option to reload object files configure:7354: result: -r configure:7381: checking how to recognize dependent libraries configure:7571: result: pass_all configure:7631: checking for ar configure:7647: found /usr/bin/ar configure:7658: result: ar configure:7740: checking for strip configure:7756: found /usr/bin/strip configure:7767: result: strip configure:7843: checking for ranlib configure:7859: found /usr/bin/ranlib configure:7870: result: ranlib configure:7964: checking command to parse /usr/bin/nm -B output from cc object configure:8082: cc -c -g -O2 conftest.c >&5 configure:8085: $? = 0 configure:8089: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' \> conftest.nm configure:8092: $? = 0 configure:8146: cc -o conftest -g -O2 conftest.c conftstm.o >&5 configure:8149: $? = 0 configure:8187: result: ok configure:8282: cc -c -g -O2 conftest.c >&5 configure:8285: $? = 0 configure:8770: checking how to run the C preprocessor configure:8810: cc -E conftest.c configure:8817: $? = 0 configure:8848: cc -E conftest.c conftest.c:15:28: error: ac_nonexistent.h: No such file or directory configure:8855: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.0-snapshot2008070100" | #define PACKAGE_STRING "netCDF 4.0-snapshot2008070100" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "4.0-snapshot2008070100" | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define USE_RENAMEV3 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | /* end confdefs.h. */ | #include configure:8888: result: cc -E configure:8917: cc -E conftest.c configure:8924: $? = 0 configure:8955: cc -E conftest.c conftest.c:15:28: error: ac_nonexistent.h: No such file or directory configure:8962: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.0-snapshot2008070100" | #define PACKAGE_STRING "netCDF 4.0-snapshot2008070100" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "4.0-snapshot2008070100" | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define USE_RENAMEV3 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | /* end confdefs.h. */ | #include configure:9000: checking for ANSI C header files configure:9030: cc -c -g -O2 conftest.c >&5 configure:9037: $? = 0 configure:9136: cc -o conftest -g -O2 conftest.c >&5 configure:9140: $? = 0 configure:9146: ./conftest configure:9150: $? = 0 configure:9168: result: yes configure:9192: checking for sys/types.h configure:9213: cc -c -g -O2 conftest.c >&5 configure:9220: $? = 0 configure:9237: result: yes configure:9192: checking for sys/stat.h configure:9213: cc -c -g -O2 conftest.c >&5 configure:9220: $? = 0 configure:9237: result: yes configure:9192: checking for stdlib.h configure:9213: cc -c -g -O2 conftest.c >&5 configure:9220: $? = 0 configure:9237: result: yes configure:9192: checking for string.h configure:9213: cc -c -g -O2 conftest.c >&5 configure:9220: $? = 0 configure:9237: result: yes configure:9192: checking for memory.h configure:9213: cc -c -g -O2 conftest.c >&5 configure:9220: $? = 0 configure:9237: result: yes configure:9192: checking for strings.h configure:9213: cc -c -g -O2 conftest.c >&5 configure:9220: $? = 0 configure:9237: result: yes configure:9192: checking for inttypes.h configure:9213: cc -c -g -O2 conftest.c >&5 configure:9220: $? = 0 configure:9237: result: yes configure:9192: checking for stdint.h configure:9213: cc -c -g -O2 conftest.c >&5 configure:9220: $? = 0 configure:9237: result: yes configure:9192: checking for unistd.h configure:9213: cc -c -g -O2 conftest.c >&5 configure:9220: $? = 0 configure:9237: result: yes configure:9254: checking for dlfcn.h configure:9275: cc -c -g -O2 conftest.c >&5 configure:9282: $? = 0 configure:9299: result: yes configure:9429: checking for C++ compiler version configure:9437: c++ --version >&5 c++ (GCC) 4.1.0 Copyright (C) 2006 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:9441: $? = 0 configure:9448: c++ -v >&5 Using built-in specs. Target: x86_64-unknown-linux-gnu Configured with: ../gcc-4.1.0/configure --enable-languages=c,c++,fortran Thread model: posix gcc version 4.1.0 configure:9452: $? = 0 configure:9459: c++ -V >&5 c++: '-V' option must have argument configure:9463: $? = 1 configure:9466: checking whether we are using the GNU C++ compiler configure:9519: result: yes configure:9528: checking whether c++ accepts -g configure:9666: result: yes configure:9691: checking dependency style of c++ configure:9782: result: gcc3 configure:9805: checking how to run the C++ preprocessor configure:9841: c++ -E conftest.cpp configure:9848: $? = 0 configure:9879: c++ -E conftest.cpp conftest.cpp:26:28: error: ac_nonexistent.h: No such file or directory configure:9886: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.0-snapshot2008070100" | #define PACKAGE_STRING "netCDF 4.0-snapshot2008070100" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "4.0-snapshot2008070100" | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define USE_RENAMEV3 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | /* end confdefs.h. */ | #include configure:9919: result: c++ -E configure:9948: c++ -E conftest.cpp configure:9955: $? = 0 configure:9986: c++ -E conftest.cpp conftest.cpp:26:28: error: ac_nonexistent.h: No such file or directory configure:9993: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.0-snapshot2008070100" | #define PACKAGE_STRING "netCDF 4.0-snapshot2008070100" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "4.0-snapshot2008070100" | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define USE_RENAMEV3 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | /* end confdefs.h. */ | #include configure:10144: checking for Fortran 77 compiler version configure:10152: gfortran --version >&5 GNU Fortran (GCC) 4.1.2 20070925 (Red Hat 4.1.2-27) Copyright (C) 2007 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:10156: $? = 0 configure:10163: gfortran -v >&5 Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --enable-plugin --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-cpu=generic --host=x86_64-redhat-linux Thread model: posix gcc version 4.1.2 20070925 (Red Hat 4.1.2-27) configure:10167: $? = 0 configure:10174: gfortran -V >&5 gfortran: '-V' option must have argument configure:10178: $? = 1 configure:10186: checking whether we are using the GNU Fortran 77 compiler configure:10229: result: yes configure:10235: checking whether gfortran accepts -g configure:10275: result: yes configure:10422: checking for Fortran compiler version configure:10430: gfortran --version >&5 GNU Fortran (GCC) 4.1.2 20070925 (Red Hat 4.1.2-27) Copyright (C) 2007 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:10434: $? = 0 configure:10441: gfortran -v >&5 Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --enable-plugin --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-cpu=generic --host=x86_64-redhat-linux Thread model: posix gcc version 4.1.2 20070925 (Red Hat 4.1.2-27) configure:10445: $? = 0 configure:10452: gfortran -V >&5 gfortran: '-V' option must have argument configure:10456: $? = 1 configure:10464: checking whether we are using the GNU Fortran compiler configure:10507: result: yes configure:10513: checking whether gfortran accepts -g configure:10553: result: yes configure:11035: checking for objdir configure:11050: result: .libs configure:11342: checking if cc supports -fno-rtti -fno-exceptions configure:11360: cc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5 cc1: warning: command line option "-fno-rtti" is valid for C++/ObjC++ but not for C configure:11364: $? = 0 configure:11377: result: no configure:11397: checking for cc option to produce PIC configure:11654: result: -fPIC -DPIC configure:11666: checking if cc PIC flag -fPIC -DPIC works configure:11684: cc -c -g -O2 -fPIC -DPIC -DPIC conftest.c >&5 configure:11688: $? = 0 configure:11701: result: yes configure:11725: checking if cc static flag -static works configure:11753: result: yes configure:11768: checking if cc supports -c -o file.o configure:11789: cc -c -g -O2 -o out/conftest2.o conftest.c >&5 configure:11793: $? = 0 configure:11815: result: yes configure:11823: checking if cc supports -c -o file.o configure:11870: result: yes configure:11903: checking whether the cc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:12969: result: yes configure:13208: checking dynamic linker characteristics configure:13651: cc -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.c >&5 configure:13658: $? = 0 configure:13891: result: GNU/Linux ld.so configure:13993: checking how to hardcode library paths into programs configure:14018: result: immediate configure:14859: checking whether stripping libraries is possible configure:14864: result: yes configure:14899: checking if libtool supports shared libraries configure:14901: result: yes configure:14904: checking whether to build shared libraries configure:14925: result: no configure:14928: checking whether to build static libraries configure:14932: result: yes configure:15082: checking for ld used by c++ configure:15149: result: /usr/bin/ld -m elf_x86_64 configure:15158: checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld configure:15173: result: yes configure:15228: checking whether the c++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:16198: result: yes configure:16226: c++ -c -g -O2 conftest.cpp >&5 configure:16229: $? = 0 configure:16411: checking for c++ option to produce PIC configure:16720: result: -fPIC -DPIC configure:16729: checking if c++ PIC flag -fPIC -DPIC works configure:16747: c++ -c -g -O2 -fPIC -DPIC -DPIC conftest.cpp >&5 configure:16751: $? = 0 configure:16764: result: yes configure:16785: checking if c++ static flag -static works configure:16813: result: yes configure:16825: checking if c++ supports -c -o file.o configure:16846: c++ -c -g -O2 -o out/conftest2.o conftest.cpp >&5 configure:16850: $? = 0 configure:16872: result: yes configure:16877: checking if c++ supports -c -o file.o configure:16924: result: yes configure:16954: checking whether the c++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:16980: result: yes configure:17117: checking dynamic linker characteristics configure:17508: c++ -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.cpp >&5 configure:17515: $? = 0 configure:17748: result: GNU/Linux ld.so configure:17799: checking how to hardcode library paths into programs configure:17824: result: immediate configure:17965: checking if libtool supports shared libraries configure:17967: result: yes configure:17970: checking whether to build shared libraries configure:17990: result: no configure:17993: checking whether to build static libraries configure:17997: result: yes configure:18011: checking for gfortran option to produce PIC configure:18268: result: -fPIC configure:18277: checking if gfortran PIC flag -fPIC works configure:18295: gfortran -c -g -O2 -fPIC conftest.f >&5 configure:18299: $? = 0 configure:18312: result: yes configure:18333: checking if gfortran static flag -static works configure:18361: result: yes configure:18373: checking if gfortran supports -c -o file.o configure:18394: gfortran -c -g -O2 -o out/conftest2.o conftest.f >&5 configure:18398: $? = 0 configure:18420: result: yes configure:18425: checking if gfortran supports -c -o file.o configure:18472: result: yes configure:18502: checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:19548: result: yes configure:19685: checking dynamic linker characteristics configure:20066: gfortran -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.f >&5 configure:20073: $? = 0 configure:20306: result: GNU/Linux ld.so configure:20357: checking how to hardcode library paths into programs configure:20382: result: immediate configure:20518: checking if libtool supports shared libraries configure:20520: result: yes configure:20523: checking whether to build shared libraries configure:20543: result: no configure:20546: checking whether to build static libraries configure:20550: result: yes configure:20576: gfortran -c -g -O2 conftest.f90 >&5 configure:20579: $? = 0 configure:20689: checking for gfortran option to produce PIC configure:20946: result: -fPIC configure:20955: checking if gfortran PIC flag -fPIC works configure:20973: gfortran -c -g -O2 -fPIC conftest.f90 >&5 configure:20977: $? = 0 configure:20990: result: yes configure:21011: checking if gfortran static flag -static works configure:21039: result: yes configure:21051: checking if gfortran supports -c -o file.o configure:21072: gfortran -c -g -O2 -o out/conftest2.o conftest.f90 >&5 configure:21076: $? = 0 configure:21098: result: yes configure:21103: checking if gfortran supports -c -o file.o configure:21150: result: yes configure:21180: checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:22226: result: yes configure:22363: checking dynamic linker characteristics configure:22744: gfortran -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.f90 >&5 configure:22751: $? = 0 configure:22984: result: GNU/Linux ld.so configure:23035: checking how to hardcode library paths into programs configure:23060: result: immediate configure:23108: finding other utilities configure:23125: checking for a BSD-compatible install configure:23193: result: /usr/bin/install -c configure:23206: trying to set fortran flags for this platform configure:23259: trying to set flags for this platform configure:23264: checking if _HPUX_SOURCE should be set configure:23280: result: no configure:23285: checking if Solaris -Xa option is needed configure:23298: result: CFLAGS=-g -O2 configure:23303: trying to set fortran 90 flags for this platform configure:23306: checking if we need to add to FFLAGS for ifort compiler configure:23314: result: FFLAGS=-g -O2 configure:23324: checking if we need to set _LARGE_FILES despite results of previous tests configure:23355: result: _LARGE_FILES= configure:23365: checking for special C compiler options needed for large files configure:23460: result: no configure:23466: checking for _FILE_OFFSET_BITS value needed for large files configure:23501: cc -c -g -O2 conftest.c >&5 configure:23508: $? = 0 configure:23577: result: no configure:23715: displaying some results configure:23721: checking CPPFLAGS configure:23723: result: configure:23725: checking CC CFLAGS configure:23727: result: cc -g -O2 configure:23730: checking type cc configure:23732: result: cc is /usr/bin/cc configure:23735: checking CXX configure:23738: result: c++ configure:23740: checking CXXFLAGS configure:23742: result: -g -O2 configure:23745: checking type c++ configure:23747: result: c++ is /usr/local/bin/c++ configure:23754: checking FC configure:23757: result: gfortran configure:23759: checking FFLAGS configure:23761: result: -g -O2 configure:23764: checking type gfortran configure:23766: result: gfortran is /usr/bin/gfortran configure:23773: checking F90 configure:23776: result: gfortran configure:23778: checking F90FLAGS configure:23780: result: configure:23783: checking type gfortran configure:23785: result: gfortran is /usr/bin/gfortran configure:23792: checking AR configure:23795: result: ar configure:23797: checking AR_FLAGS configure:23799: result: cru configure:23802: checking type ar configure:23804: result: ar is /usr/bin/ar configure:23811: checking NM configure:23814: result: /usr/bin/nm -B configure:23816: checking NMFLAGS configure:23818: result: configure:23890: checking for /usr/bin/nm configure:23917: result: /usr/bin/nm -B configure:23930: checking nm flags configure:23935: result: configure:23947: checking for C-equivalent to Fortran routine "SUB" configure:23954: gfortran -c -g -O2 conftest.f configure:23957: $? = 0 configure:23969: result: sub_ configure:23991: checking for Fortran "byte" configure:23999: gfortran -c -g -O2 conftest.f configure:24002: $? = 0 configure:24004: result: yes configure:24022: checking for Fortran "integer*2" configure:24030: gfortran -c -g -O2 conftest.f configure:24033: $? = 0 configure:24035: result: yes configure:24062: checking if Fortran "byte" is C "signed char" configure:24072: cc -c -g -O2 conftest.c conftest.c: In function 'sub_': conftest.c:4: warning: incompatible implicit declaration of built-in function 'exit' configure:24075: $? = 0 configure:24078: gfortran -g -O2 -c conftestf.f configure:24081: $? = 0 configure:24084: gfortran -o conftest -g -O2 conftestf.o conftest.o configure:24087: $? = 0 configure:24090: ./conftest configure:24093: $? = 0 configure:24095: result: yes configure:24135: checking if Fortran "byte" is C "short" configure:24145: cc -c -g -O2 conftest.c conftest.c: In function 'sub_': conftest.c:4: warning: incompatible implicit declaration of built-in function 'exit' configure:24148: $? = 0 configure:24151: gfortran -g -O2 -c conftestf.f configure:24154: $? = 0 configure:24157: gfortran -o conftest -g -O2 conftestf.o conftest.o configure:24160: $? = 0 configure:24163: ./conftest configure:24166: $? = 1 configure:24179: result: no configure:24208: checking if Fortran "byte" is C "int" configure:24218: cc -c -g -O2 conftest.c conftest.c: In function 'sub_': conftest.c:4: warning: incompatible implicit declaration of built-in function 'exit' configure:24221: $? = 0 configure:24224: gfortran -g -O2 -c conftestf.f configure:24227: $? = 0 configure:24230: gfortran -o conftest -g -O2 conftestf.o conftest.o configure:24233: $? = 0 configure:24236: ./conftest configure:24239: $? = 1 configure:24252: result: no configure:24281: checking if Fortran "byte" is C "long" configure:24291: cc -c -g -O2 conftest.c conftest.c: In function 'sub_': conftest.c:4: warning: incompatible implicit declaration of built-in function 'exit' configure:24294: $? = 0 configure:24297: gfortran -g -O2 -c conftestf.f configure:24300: $? = 0 configure:24303: gfortran -o conftest -g -O2 conftestf.o conftest.o configure:24306: $? = 0 configure:24309: ./conftest configure:24312: $? = 1 configure:24325: result: no configure:24358: checking if Fortran "integer*2" is C "short" configure:24368: cc -c -g -O2 conftest.c conftest.c: In function 'sub_': conftest.c:4: warning: incompatible implicit declaration of built-in function 'exit' configure:24371: $? = 0 configure:24374: gfortran -g -O2 -c conftestf.f configure:24377: $? = 0 configure:24380: gfortran -o conftest -g -O2 conftestf.o conftest.o configure:24383: $? = 0 configure:24386: ./conftest configure:24389: $? = 0 configure:24391: result: yes configure:24431: checking if Fortran "integer*2" is C "int" configure:24441: cc -c -g -O2 conftest.c conftest.c: In function 'sub_': conftest.c:4: warning: incompatible implicit declaration of built-in function 'exit' configure:24444: $? = 0 configure:24447: gfortran -g -O2 -c conftestf.f configure:24450: $? = 0 configure:24453: gfortran -o conftest -g -O2 conftestf.o conftest.o configure:24456: $? = 0 configure:24459: ./conftest configure:24462: $? = 1 configure:24475: result: no configure:24504: checking if Fortran "integer*2" is C "long" configure:24514: cc -c -g -O2 conftest.c conftest.c: In function 'sub_': conftest.c:4: warning: incompatible implicit declaration of built-in function 'exit' configure:24517: $? = 0 configure:24520: gfortran -g -O2 -c conftestf.f configure:24523: $? = 0 configure:24526: gfortran -o conftest -g -O2 conftestf.o conftest.o configure:24529: $? = 0 configure:24532: ./conftest configure:24535: $? = 1 configure:24548: result: no configure:24579: checking if Fortran "integer" is C "int" configure:24589: cc -c -g -O2 conftest.c conftest.c: In function 'sub_': conftest.c:4: warning: incompatible implicit declaration of built-in function 'exit' configure:24592: $? = 0 configure:24595: gfortran -g -O2 -c conftestf.f configure:24598: $? = 0 configure:24601: gfortran -o conftest -g -O2 conftestf.o conftest.o configure:24604: $? = 0 configure:24607: ./conftest configure:24610: $? = 0 configure:24612: result: yes configure:24652: checking if Fortran "real" is C "float" configure:24662: cc -c -g -O2 conftest.c conftest.c: In function 'sub_': conftest.c:4: warning: incompatible implicit declaration of built-in function 'exit' configure:24665: $? = 0 configure:24668: gfortran -g -O2 -c conftestf.f configure:24671: $? = 0 configure:24674: gfortran -o conftest -g -O2 conftestf.o conftest.o configure:24677: $? = 0 configure:24680: ./conftest configure:24683: $? = 0 configure:24685: result: yes configure:24725: checking if Fortran "doubleprecision" is C "double" configure:24735: cc -c -g -O2 conftest.c conftest.c: In function 'sub_': conftest.c:4: warning: incompatible implicit declaration of built-in function 'exit' configure:24738: $? = 0 configure:24741: gfortran -g -O2 -c conftestf.f configure:24744: $? = 0 configure:24747: gfortran -o conftest -g -O2 conftestf.o conftest.o configure:24750: $? = 0 configure:24753: ./conftest configure:24756: $? = 0 configure:24758: result: yes configure:24792: checking for Fortran-equivalent to netCDF "byte" configure:24800: gfortran -c -g -O2 conftest.f configure:24803: $? = 0 configure:24814: result: byte configure:24820: checking for Fortran-equivalent to netCDF "short" configure:24828: gfortran -c -g -O2 conftest.f configure:24831: $? = 0 configure:24842: result: integer*2 configure:24909: checking if Fortran 90 compiler capitalizes .mod filenames configure:24916: gfortran conftest.f90 >&5 /usr/lib/gcc/x86_64-redhat-linux/4.1.2/libgfortranbegin.a(fmain.o): In function `main': (.text+0xa): undefined reference to `MAIN__' collect2: ld returned 1 exit status configure:24919: $? = 1 configure:24927: result: no configure:24948: checking types, headers, and functions configure:24952: checking for stdlib.h configure:24957: result: yes configure:25095: checking for sys/types.h configure:25100: result: yes configure:25239: checking for stdbool.h that conforms to C99 configure:25334: cc -c -g -O2 conftest.c >&5 configure:25341: $? = 0 configure:25356: result: yes configure:25358: checking for _Bool configure:25386: cc -c -g -O2 conftest.c >&5 configure:25393: $? = 0 configure:25420: cc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:73: error: expected expression before ')' token configure:25427: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.0-snapshot2008070100" | #define PACKAGE_STRING "netCDF 4.0-snapshot2008070100" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "4.0-snapshot2008070100" | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define USE_RENAMEV3 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define gFortran 1 | #define NF_INT1_T byte | #define NF_INT2_T integer*2 | #define NF_INT1_IS_C_SIGNED_CHAR 1 | #define NF_INT2_IS_C_SHORT 1 | #define NF_INT_IS_C_INT 1 | #define NF_REAL_IS_C_FLOAT 1 | #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1 | #define NCBYTE_T byte | #define NCSHORT_T integer*2 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((_Bool))) | return 0; | ; | return 0; | } configure:25450: result: yes configure:25476: checking for strlcat configure:25532: cc -o conftest -g -O2 conftest.c >&5 /tmp/ccgpy7pZ.o: In function `main': /shecky/n4_test/conftest.c:73: undefined reference to `strlcat' collect2: ld returned 1 exit status configure:25539: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.0-snapshot2008070100" | #define PACKAGE_STRING "netCDF 4.0-snapshot2008070100" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "4.0-snapshot2008070100" | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define USE_RENAMEV3 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define gFortran 1 | #define NF_INT1_T byte | #define NF_INT2_T integer*2 | #define NF_INT1_IS_C_SIGNED_CHAR 1 | #define NF_INT2_IS_C_SHORT 1 | #define NF_INT_IS_C_INT 1 | #define NF_REAL_IS_C_FLOAT 1 | #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1 | #define NCBYTE_T byte | #define NCSHORT_T integer*2 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | /* end confdefs.h. */ | /* Define strlcat to an innocuous variant, in case declares strlcat. | For example, HP-UX 11i declares gettimeofday. */ | #define strlcat innocuous_strlcat | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char strlcat (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef strlcat | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char strlcat (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_strlcat || defined __stub___strlcat | choke me | #endif | | int | main () | { | return strlcat (); | ; | return 0; | } configure:25561: result: no configure:25476: checking for strerror configure:25532: cc -o conftest -g -O2 conftest.c >&5 configure:25539: $? = 0 configure:25561: result: yes configure:25574: checking for working alloca.h configure:25601: cc -o conftest -g -O2 conftest.c >&5 configure:25608: $? = 0 configure:25628: result: yes configure:25638: checking for alloca configure:25685: cc -o conftest -g -O2 conftest.c >&5 configure:25692: $? = 0 configure:25712: result: yes configure:25948: checking whether isnan is declared configure:25978: cc -c -g -O2 conftest.c >&5 configure:25985: $? = 0 configure:26000: result: yes configure:26016: checking whether isinf is declared configure:26046: cc -c -g -O2 conftest.c >&5 configure:26053: $? = 0 configure:26068: result: yes configure:26084: checking whether isfinite is declared configure:26114: cc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:50: error: 'isfinite' undeclared (first use in this function) conftest.c:50: error: (Each undeclared identifier is reported only once conftest.c:50: error: for each function it appears in.) configure:26121: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.0-snapshot2008070100" | #define PACKAGE_STRING "netCDF 4.0-snapshot2008070100" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "4.0-snapshot2008070100" | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define USE_RENAMEV3 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define gFortran 1 | #define NF_INT1_T byte | #define NF_INT2_T integer*2 | #define NF_INT1_IS_C_SIGNED_CHAR 1 | #define NF_INT2_IS_C_SHORT 1 | #define NF_INT_IS_C_INT 1 | #define NF_REAL_IS_C_FLOAT 1 | #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1 | #define NCBYTE_T byte | #define NCSHORT_T integer*2 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | /* end confdefs.h. */ | #include | | int | main () | { | #ifndef isfinite | (void) isfinite; | #endif | | ; | return 0; | } configure:26136: result: no configure:26152: checking whether signbit is declared configure:26182: cc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:51: error: 'signbit' undeclared (first use in this function) conftest.c:51: error: (Each undeclared identifier is reported only once conftest.c:51: error: for each function it appears in.) configure:26189: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.0-snapshot2008070100" | #define PACKAGE_STRING "netCDF 4.0-snapshot2008070100" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "4.0-snapshot2008070100" | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define USE_RENAMEV3 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define gFortran 1 | #define NF_INT1_T byte | #define NF_INT2_T integer*2 | #define NF_INT1_IS_C_SIGNED_CHAR 1 | #define NF_INT2_IS_C_SHORT 1 | #define NF_INT_IS_C_INT 1 | #define NF_REAL_IS_C_FLOAT 1 | #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1 | #define NCBYTE_T byte | #define NCSHORT_T integer*2 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 0 | /* end confdefs.h. */ | #include | | int | main () | { | #ifndef signbit | (void) signbit; | #endif | | ; | return 0; | } configure:26204: result: no configure:26228: checking for long long int configure:26275: cc -o conftest -g -O2 conftest.c >&5 configure:26282: $? = 0 configure:26329: cc -o conftest -g -O2 conftest.c >&5 configure:26333: $? = 0 configure:26339: ./conftest configure:26343: $? = 0 configure:26370: result: yes configure:26381: checking for unsigned long long int configure:26428: cc -o conftest -g -O2 conftest.c >&5 configure:26435: $? = 0 configure:26455: result: yes configure:26472: checking for struct stat.st_blksize configure:26500: cc -c -g -O2 conftest.c >&5 configure:26507: $? = 0 configure:26565: result: yes configure:26582: checking for IEEE floating point format configure:26630: cc -o conftest -g -O2 conftest.c >&5 configure:26634: $? = 0 configure:26640: ./conftest configure:26644: $? = 0 configure:26660: result: yes configure:26670: checking for size_t configure:26698: cc -c -g -O2 conftest.c >&5 configure:26705: $? = 0 configure:26732: cc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:86: error: expected expression before ')' token configure:26739: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.0-snapshot2008070100" | #define PACKAGE_STRING "netCDF 4.0-snapshot2008070100" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "4.0-snapshot2008070100" | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define USE_RENAMEV3 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define gFortran 1 | #define NF_INT1_T byte | #define NF_INT2_T integer*2 | #define NF_INT1_IS_C_SIGNED_CHAR 1 | #define NF_INT2_IS_C_SHORT 1 | #define NF_INT_IS_C_INT 1 | #define NF_REAL_IS_C_FLOAT 1 | #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1 | #define NCBYTE_T byte | #define NCSHORT_T integer*2 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 0 | #define HAVE_DECL_SIGNBIT 0 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_UNSIGNED_LONG_LONG_INT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:26762: result: yes configure:26774: checking for off_t configure:26802: cc -c -g -O2 conftest.c >&5 configure:26809: $? = 0 configure:26836: cc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:86: error: expected expression before ')' token configure:26843: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.0-snapshot2008070100" | #define PACKAGE_STRING "netCDF 4.0-snapshot2008070100" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "4.0-snapshot2008070100" | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define USE_RENAMEV3 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define gFortran 1 | #define NF_INT1_T byte | #define NF_INT2_T integer*2 | #define NF_INT1_IS_C_SIGNED_CHAR 1 | #define NF_INT2_IS_C_SHORT 1 | #define NF_INT_IS_C_INT 1 | #define NF_REAL_IS_C_FLOAT 1 | #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1 | #define NCBYTE_T byte | #define NCSHORT_T integer*2 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 0 | #define HAVE_DECL_SIGNBIT 0 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_UNSIGNED_LONG_LONG_INT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((off_t))) | return 0; | ; | return 0; | } configure:26866: result: yes configure:26878: checking for ssize_t configure:26906: cc -c -g -O2 conftest.c >&5 configure:26913: $? = 0 configure:26940: cc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:86: error: expected expression before ')' token configure:26947: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.0-snapshot2008070100" | #define PACKAGE_STRING "netCDF 4.0-snapshot2008070100" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "4.0-snapshot2008070100" | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define USE_RENAMEV3 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define gFortran 1 | #define NF_INT1_T byte | #define NF_INT2_T integer*2 | #define NF_INT1_IS_C_SIGNED_CHAR 1 | #define NF_INT2_IS_C_SHORT 1 | #define NF_INT_IS_C_INT 1 | #define NF_REAL_IS_C_FLOAT 1 | #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1 | #define NCBYTE_T byte | #define NCSHORT_T integer*2 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 0 | #define HAVE_DECL_SIGNBIT 0 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_UNSIGNED_LONG_LONG_INT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((ssize_t))) | return 0; | ; | return 0; | } configure:26970: result: yes configure:26980: checking for ptrdiff_t configure:27008: cc -c -g -O2 conftest.c >&5 configure:27015: $? = 0 configure:27042: cc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:87: error: expected expression before ')' token configure:27049: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.0-snapshot2008070100" | #define PACKAGE_STRING "netCDF 4.0-snapshot2008070100" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "4.0-snapshot2008070100" | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define USE_RENAMEV3 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define gFortran 1 | #define NF_INT1_T byte | #define NF_INT2_T integer*2 | #define NF_INT1_IS_C_SIGNED_CHAR 1 | #define NF_INT2_IS_C_SHORT 1 | #define NF_INT_IS_C_INT 1 | #define NF_REAL_IS_C_FLOAT 1 | #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1 | #define NCBYTE_T byte | #define NCSHORT_T integer*2 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 0 | #define HAVE_DECL_SIGNBIT 0 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_UNSIGNED_LONG_LONG_INT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((ptrdiff_t))) | return 0; | ; | return 0; | } configure:27072: result: yes configure:27082: checking for uchar configure:27110: cc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:88: error: 'uchar' undeclared (first use in this function) conftest.c:88: error: (Each undeclared identifier is reported only once conftest.c:88: error: for each function it appears in.) configure:27117: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.0-snapshot2008070100" | #define PACKAGE_STRING "netCDF 4.0-snapshot2008070100" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "4.0-snapshot2008070100" | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define USE_RENAMEV3 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define gFortran 1 | #define NF_INT1_T byte | #define NF_INT2_T integer*2 | #define NF_INT1_IS_C_SIGNED_CHAR 1 | #define NF_INT2_IS_C_SHORT 1 | #define NF_INT_IS_C_INT 1 | #define NF_REAL_IS_C_FLOAT 1 | #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1 | #define NCBYTE_T byte | #define NCSHORT_T integer*2 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 0 | #define HAVE_DECL_SIGNBIT 0 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_UNSIGNED_LONG_LONG_INT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof (uchar)) | return 0; | ; | return 0; | } configure:27174: result: no configure:27189: checking whether char is unsigned configure:27217: cc -c -g -O2 conftest.c >&5 configure:27224: $? = 0 configure:27239: result: no configure:27249: checking whether byte ordering is bigendian configure:27274: cc -c -g -O2 conftest.c >&5 conftest.c:53: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'is' configure:27281: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.0-snapshot2008070100" | #define PACKAGE_STRING "netCDF 4.0-snapshot2008070100" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "4.0-snapshot2008070100" | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define USE_RENAMEV3 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define gFortran 1 | #define NF_INT1_T byte | #define NF_INT2_T integer*2 | #define NF_INT1_IS_C_SIGNED_CHAR 1 | #define NF_INT2_IS_C_SHORT 1 | #define NF_INT_IS_C_INT 1 | #define NF_REAL_IS_C_FLOAT 1 | #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1 | #define NCBYTE_T byte | #define NCSHORT_T integer*2 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 0 | #define HAVE_DECL_SIGNBIT 0 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_UNSIGNED_LONG_LONG_INT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | /* end confdefs.h. */ | #if ! (defined __BIG_ENDIAN__ || defined __LITTLE_ENDIAN__) | neither is defined; | #endif | typedef int dummy; | configure:27325: cc -c -g -O2 conftest.c >&5 configure:27332: $? = 0 configure:27364: cc -c -g -O2 conftest.c >&5 conftest.c: In function 'main': conftest.c:59: error: 'not' undeclared (first use in this function) conftest.c:59: error: (Each undeclared identifier is reported only once conftest.c:59: error: for each function it appears in.) conftest.c:59: error: expected ';' before 'big' configure:27371: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.0-snapshot2008070100" | #define PACKAGE_STRING "netCDF 4.0-snapshot2008070100" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "4.0-snapshot2008070100" | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define USE_RENAMEV3 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define gFortran 1 | #define NF_INT1_T byte | #define NF_INT2_T integer*2 | #define NF_INT1_IS_C_SIGNED_CHAR 1 | #define NF_INT2_IS_C_SHORT 1 | #define NF_INT_IS_C_INT 1 | #define NF_REAL_IS_C_FLOAT 1 | #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1 | #define NCBYTE_T byte | #define NCSHORT_T integer*2 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 0 | #define HAVE_DECL_SIGNBIT 0 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_UNSIGNED_LONG_LONG_INT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | /* end confdefs.h. */ | #include | #include | | int | main () | { | #if BYTE_ORDER != BIG_ENDIAN | not big endian | #endif | | ; | return 0; | } configure:27623: result: no configure:27647: checking size of short configure:27950: cc -o conftest -g -O2 conftest.c >&5 configure:27954: $? = 0 configure:27960: ./conftest configure:27964: $? = 0 configure:27988: result: 2 configure:28002: checking size of int configure:28305: cc -o conftest -g -O2 conftest.c >&5 configure:28309: $? = 0 configure:28315: ./conftest configure:28319: $? = 0 configure:28343: result: 4 configure:28357: checking size of long configure:28660: cc -o conftest -g -O2 conftest.c >&5 configure:28664: $? = 0 configure:28670: ./conftest configure:28674: $? = 0 configure:28698: result: 8 configure:28712: checking size of float configure:29015: cc -o conftest -g -O2 conftest.c >&5 configure:29019: $? = 0 configure:29025: ./conftest configure:29029: $? = 0 configure:29053: result: 4 configure:29067: checking size of double configure:29370: cc -o conftest -g -O2 conftest.c >&5 configure:29374: $? = 0 configure:29380: ./conftest configure:29384: $? = 0 configure:29408: result: 8 configure:29422: checking size of off_t configure:29725: cc -o conftest -g -O2 conftest.c >&5 configure:29729: $? = 0 configure:29735: ./conftest configure:29739: $? = 0 configure:29763: result: 8 configure:29777: checking size of size_t configure:30080: cc -o conftest -g -O2 conftest.c >&5 configure:30084: $? = 0 configure:30090: ./conftest configure:30094: $? = 0 configure:30118: result: 8 configure:30217: checking for manual-page index command configure:30219: result: configure:30230: checking what to call the output of the ftpbin target configure:30239: result: binary-netcdf-4.0-snapshot2008070100_gfortran_gfortran.tar gfortran c++ configure:30242: checking binary distribution directory configure:30250: result: /home/ftp/pub/binary/linux_2.6-x86_64 configure:30291: checking hdf5.h usability configure:30308: cc -c -g -O2 -I/upc/share/ed/local/shecky/include conftest.c >&5 configure:30315: $? = 0 configure:30329: result: yes configure:30333: checking hdf5.h presence configure:30348: cc -E -I/upc/share/ed/local/shecky/include conftest.c configure:30355: $? = 0 configure:30369: result: yes configure:30402: checking for hdf5.h configure:30411: result: yes configure:30430: checking for H5Fflush in -lhdf5 configure:30465: cc -o conftest -g -O2 -I/upc/share/ed/local/shecky/include -L/upc/share/ed/local/shecky/lib -L/upc/share/ed/local/shecky/lib conftest.c -lhdf5 -lm -lz -lhdf5 >&5 configure:30472: $? = 0 configure:30493: result: yes configure:30520: checking for H5DSis_scale in -lhdf5_hl configure:30555: cc -o conftest -g -O2 -I/upc/share/ed/local/shecky/include -L/upc/share/ed/local/shecky/lib -L/upc/share/ed/local/shecky/lib conftest.c -lhdf5_hl -lhdf5 -lm -lz -lhdf5 >&5 configure:30562: $? = 0 configure:30583: result: yes configure:30603: checking for H5Pget_fapl_mpiposix in -lhdf5 configure:30638: cc -o conftest -g -O2 -I/upc/share/ed/local/shecky/include -L/upc/share/ed/local/shecky/lib -L/upc/share/ed/local/shecky/lib conftest.c -lhdf5 -lhdf5_hl -lhdf5 -lm -lz -lhdf5 >&5 /tmp/cciyuRfy.o: In function `main': /shecky/n4_test/conftest.c:73: undefined reference to `H5Pget_fapl_mpiposix' collect2: ld returned 1 exit status configure:30645: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.0-snapshot2008070100" | #define PACKAGE_STRING "netCDF 4.0-snapshot2008070100" | #define PACKAGE_BUGREPORT "support@unidata.ucar.edu" | #define PACKAGE "netcdf" | #define VERSION "4.0-snapshot2008070100" | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define USE_RENAMEV3 1 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define gFortran 1 | #define NF_INT1_T byte | #define NF_INT2_T integer*2 | #define NF_INT1_IS_C_SIGNED_CHAR 1 | #define NF_INT2_IS_C_SHORT 1 | #define NF_INT_IS_C_INT 1 | #define NF_REAL_IS_C_FLOAT 1 | #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1 | #define NCBYTE_T byte | #define NCSHORT_T integer*2 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 0 | #define HAVE_DECL_SIGNBIT 0 | #define HAVE_LONG_LONG_INT 1 | #define HAVE_UNSIGNED_LONG_LONG_INT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_OFF_T 8 | #define SIZEOF_SIZE_T 8 | #define HAVE_HDF5_H 1 | #define HAVE_LIBHDF5 1 | #define HAVE_LIBHDF5_HL 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC |